RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TBC1D10AQ9BXI6 508 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 IKBKGQ9Y6K9 419 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 WDR87Q6ZQQ6 2873 aa21.11■□□□□ 0.97
SNX1-206ENST00000559389 GOLGA4Q13439 2230 aaKnown RBP21.1■□□□□ 0.97
SNX1-206ENST00000559389 A0A1W2PQM1 296 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 NTN3O00634 580 aaPredicted RBP21.1■□□□□ 0.97
SNX1-206ENST00000559389 CASC3O15234 703 aaKnown RBP21.1■□□□□ 0.97
SNX1-206ENST00000559389 ZW10O43264 779 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 RPN2P04844 631 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 STMN1P16949 149 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 MSH2P43246 934 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 SERPINB9P50453 376 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 CCL7P80098 99 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 GPLD1P80108 840 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 MAP9Q49MG5 647 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 TMEM207Q6UWW9 146 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 DHRS13Q6UX07 377 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 TAOK1Q7L7X3 1001 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 MREGQ8N565 214 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 WDR48Q8TAF3 677 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 EEF1AKMT1Q8WVE0 214 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 FOPNLQ96NB1 174 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 LRRN3Q9H3W5 708 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 EPB41L1Q9H4G0 881 aa21.1■□□□□ 0.97
SNX1-206ENST00000559389 PHGDHO43175 533 aaKnown RBP21.09■□□□□ 0.97
SNX1-206ENST00000559389 PSIP1O75475 530 aaKnown RBP21.09■□□□□ 0.97
SNX1-206ENST00000559389 C1orf105O95561 183 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 SHBGP04278 402 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 CSF2RBP32927 897 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 MAPK9P45984 424 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 BDKRB1P46663 353 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 IL2P60568 153 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 RAB10P61026 200 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 INSM1Q01101 510 aaPredicted RBP21.09■□□□□ 0.97
SNX1-206ENST00000559389 PLCL1Q15111 1095 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 CYHR1Q6ZMK1 362 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 CMC1Q7Z7K0 106 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 MYO1HQ8N1T3 1032 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 OR52E1Q8NGJ3 308 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 OR10G6Q8NH81 332 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 CFAP61Q8NHU2 1237 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 JPH3Q8WXH2 748 aaPredicted RBP21.09■□□□□ 0.97
SNX1-206ENST00000559389 ADAMTS14Q8WXS8 1223 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 SYNDIG1Q9H7V2 258 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 OGFRQ9NZT2 677 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 POLG2Q9UHN1 485 aa21.09■□□□□ 0.97
SNX1-206ENST00000559389 ARHGEF33A8MVX0 844 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 D6RAR5 112 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 DUX1O43812 170 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 NUDT17P0C025 328 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 CNTFP26441 200 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 CD1CP29017 333 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 CSRP3P50461 194 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 PRKG2Q13237 762 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 SQSTM1Q13501 440 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 CLPPQ16740 277 aaPredicted RBP21.08■□□□□ 0.97
SNX1-206ENST00000559389 MROH9Q5TGP6 573 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 TFB2MQ9H5Q4 396 aaKnown RBP21.08■□□□□ 0.97
SNX1-206ENST00000559389 SYTL2Q9HCH5 934 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 GPAMQ9HCL2 828 aa21.08■□□□□ 0.97
SNX1-206ENST00000559389 RP1P56715 2156 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 FAM221BA6H8Z2 402 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 CTIFO43310 598 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 TCEA3O75764 348 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 KRT38O76015 456 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 UBXN7O94888 489 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 CATP04040 527 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 PROS1P07225 676 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 TPBGLP0DKB5 382 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 CCNFP41002 786 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 CAPZBP47756 277 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 SERPINB8P50452 374 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 SP140Q13342 867 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 SPIDRQ14159 915 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 GRB7Q14451 532 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 AMZ1Q400G9 498 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 CDCP2Q5VXM1 449 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 NKAIN2Q5VXU1 208 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 ADGRD1Q6QNK2 874 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 DGLUCYQ7Z3D6 616 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 NKAPQ8N5F7 415 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 ANKRD49Q8WVL7 239 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 ASB11Q8WXH4 323 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 RSC1A1Q92681 617 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 ISL2Q96A47 359 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 PDLIM5Q96HC4 596 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 GFM1Q96RP9 751 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 CCDC77Q9BR77 488 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 MENTQ9BUN1 341 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 ABCG4Q9H172 646 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 PPCSQ9HAB8 311 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 SNX15Q9NRS6 342 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 ICKQ9UPZ9 632 aa21.07■□□□□ 0.96
SNX1-206ENST00000559389 TDRKHQ9Y2W6 561 aaKnown RBP21.07■□□□□ 0.96
SNX1-206ENST00000559389 ASXL3Q9C0F0 2248 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 CCDC151A5D8V7 595 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 GFYI3L273 518 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 CPNE6O95741 557 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms