RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NR4A3Q92570 626 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.01□□□□□ -1.61
SPG11-208ENST00000558155 C14orf79Q96F83 325 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CCDC120Q96HB5 630 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MAGEB10Q96LZ2 347 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 ZNF830Q96NB3 372 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 FERD3LQ96RJ6 166 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 SPOCK3Q9BQ16 436 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TRIM8Q9BZR9 551 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TRIM7Q9C029 511 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 SPRTNQ9H040 489 aaPredicted RBP5.01□□□□□ -1.61
SPG11-208ENST00000558155 CLSTN2Q9H4D0 955 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TRABDQ9H4I3 376 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 SLC6A20Q9NP91 592 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 IRAK4Q9NWZ3 460 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 MYO1AQ9UBC5 1043 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 IP6K2Q9UHH9 426 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CDC23Q9UJX2 597 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TMPRSS11EQ9UL52 423 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 CSAG2Q9Y5P2 127 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 FBN2P35556 2912 aa5.01□□□□□ -1.61
SPG11-208ENST00000558155 TRAV17A0A0B4J275 112 aa5□□□□□ -1.61
SPG11-208ENST00000558155 DYTNA2CJ06 578 aa5□□□□□ -1.61
SPG11-208ENST00000558155 MYO1FO00160 1098 aa5□□□□□ -1.61
SPG11-208ENST00000558155 IFRD1O00458 451 aaPredicted RBP5□□□□□ -1.61
SPG11-208ENST00000558155 MFSD11O43934 449 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A9O60656 530 aa5□□□□□ -1.61
SPG11-208ENST00000558155 FAM155BO75949 473 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UNC5CO95185 931 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CLDN14O95500 239 aa5□□□□□ -1.61
SPG11-208ENST00000558155 NDST3O95803 873 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ALBP02768 609 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UMODP07911 640 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CD99P14209 185 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A6P19224 532 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ITGAXP20702 1163 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A1P22309 533 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A4P22310 534 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ALAS2P22557 587 aa5□□□□□ -1.61
SPG11-208ENST00000558155 HMGCLP35914 325 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SPAM1P38567 509 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CA7P43166 264 aa5□□□□□ -1.61
SPG11-208ENST00000558155 TNNT3P45378 269 aaPredicted RBP5□□□□□ -1.61
SPG11-208ENST00000558155 TDGF1P3P51864 188 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ARSFP54793 590 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UBE2HP62256 183 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ARG2P78540 354 aa5□□□□□ -1.61
SPG11-208ENST00000558155 MFAP5Q13361 173 aa5□□□□□ -1.61
SPG11-208ENST00000558155 PDK2Q15119 407 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SLC14A2Q15849 920 aa5□□□□□ -1.61
SPG11-208ENST00000558155 INAQ16352 499 aa5□□□□□ -1.61
SPG11-208ENST00000558155 PCSK7Q16549 785 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SLC5A12Q1EHB4 618 aa5□□□□□ -1.61
SPG11-208ENST00000558155 DPCR1Q3MIW9 517 aa5□□□□□ -1.61
SPG11-208ENST00000558155 TUBB8Q3ZCM7 444 aa5□□□□□ -1.61
SPG11-208ENST00000558155 FNBP1LQ5T0N5 605 aa5□□□□□ -1.61
SPG11-208ENST00000558155 NCBP2-AS2Q69YL0 99 aa5□□□□□ -1.61
SPG11-208ENST00000558155 TXNRD3NBQ6F5E7 133 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SARM1Q6SZW1 724 aa5□□□□□ -1.61
SPG11-208ENST00000558155 LINC00696Q6ZRV3 163 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CDHR3Q6ZTQ4 885 aa5□□□□□ -1.61
SPG11-208ENST00000558155 OVCH1Q7RTY7 1134 aa5□□□□□ -1.61
SPG11-208ENST00000558155 AMIGO1Q86WK6 493 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CEP97Q8IW35 865 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ZNF655Q8N720 491 aaPredicted RBP5□□□□□ -1.61
SPG11-208ENST00000558155 OR2L2Q8NH16 312 aa5□□□□□ -1.61
SPG11-208ENST00000558155 FAM71BQ8TC56 605 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ZNF398Q8TD17 642 aa5□□□□□ -1.61
SPG11-208ENST00000558155 DLG3Q92796 817 aa5□□□□□ -1.61
SPG11-208ENST00000558155 HAS2Q92819 552 aa5□□□□□ -1.61
SPG11-208ENST00000558155 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 IMP4Q96G21 291 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 THOC3Q96J01 351 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 TRIB3Q96RU7 358 aa5□□□□□ -1.61
SPG11-208ENST00000558155 USB1Q9BQ65 265 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 PITPNM3Q9BZ71 974 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CHRNA10Q9GZZ6 450 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SLC25A51Q9H1U9 297 aa5□□□□□ -1.61
SPG11-208ENST00000558155 TFB2MQ9H5Q4 396 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A7Q9HAW7 530 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A10Q9HAW8 530 aa5□□□□□ -1.61
SPG11-208ENST00000558155 UGT1A8Q9HAW9 530 aa5□□□□□ -1.61
SPG11-208ENST00000558155 MRM3Q9HC36 420 aaKnown RBP5□□□□□ -1.61
SPG11-208ENST00000558155 MCCC2Q9HCC0 563 aa5□□□□□ -1.61
SPG11-208ENST00000558155 IL26Q9NPH9 171 aa5□□□□□ -1.61
SPG11-208ENST00000558155 FANCLQ9NW38 375 aa5□□□□□ -1.61
SPG11-208ENST00000558155 ACTR10Q9NZ32 417 aa5□□□□□ -1.61
SPG11-208ENST00000558155 HACD3Q9P035 362 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SEC14L3Q9UDX4 400 aa5□□□□□ -1.61
SPG11-208ENST00000558155 FBXL4Q9UKA2 621 aa5□□□□□ -1.61
SPG11-208ENST00000558155 MYO6Q9UM54 1294 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CDYLQ9Y232 598 aa5□□□□□ -1.61
SPG11-208ENST00000558155 PCSK5Q92824 1860 aa5□□□□□ -1.61
SPG11-208ENST00000558155 SETD2Q9BYW2 2564 aaPredicted RBP5□□□□□ -1.61
SPG11-208ENST00000558155 ITPR3Q14573 2671 aa5□□□□□ -1.61
SPG11-208ENST00000558155 CRYBG3Q68DQ2 2970 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 CCDC168Q8NDH2 2452 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 GLYATL1P3A0A0U1RQE8 302 aa4.99□□□□□ -1.61
SPG11-208ENST00000558155 C17orf113A0A1B0GUU1 675 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms