RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CTSFQ9UBX1 484 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 SLC24A2Q9UI40 661 aa9.02□□□□□ -0.97
NEDD1-211ENST00000557454 C1orf232A0A0U1RR37 186 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 C2CD4BA6NLJ0 364 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 MAP2K7O14733 419 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 TTI1O43156 1089 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 FZD6O60353 706 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CDK14O94921 469 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PNMA6AP0CW24 399 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 MYBL2P10244 700 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PFKFB1P16118 471 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 FDXRP22570 491 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CDH5P33151 784 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 RFC1P35251 1148 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 HSPA9P38646 679 aaKnown RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PRCPP42785 496 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PTPN9P43378 593 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 XRCC4Q13426 336 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CAMK4Q16566 473 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 KRTAP24-1Q3LI83 254 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 TFDP3Q5H9I0 405 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 ATG9BQ674R7 924 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 COX15Q7KZN9 410 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 OVCH1Q7RTY7 1134 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CXorf67Q86X51 503 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 P3H2Q8IVL5 708 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 OR4E2Q8NGC2 313 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CENPIQ92674 756 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 GLYATL1Q969I3 302 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 ZNF396Q96N95 335 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PDCL3Q9H2J4 239 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 KIR3DX1Q9H7L2 352 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 KLHL1Q9NR64 748 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 IRAK4Q9NWZ3 460 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 PKD2L2Q9NZM6 624 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 DNPEPQ9ULA0 475 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 CBLCQ9ULV8 474 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
NEDD1-211ENST00000557454 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 ARID1AO14497 2285 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 NSG1A0A0A6YYJ2 146 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 A0A1B0GVL5 298 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 ASPDHA6ND91 283 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 SPRY1O43609 319 aaPredicted RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 WFS1O76024 890 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 BMP10O95393 424 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 SERPINA7P05543 415 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 COX6A1P12074 109 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 ALAS2P22557 587 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 NSG1P42857 185 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 FBXW10Q5XX13 1052 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 SCYL2Q6P3W7 929 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 KRBA2Q6ZNG9 492 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 NEK10Q6ZWH5 1172 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 TMTC1Q8IUR5 882 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 RAVER1Q8IY67 606 aaKnown RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 AMER2Q8N7J2 671 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 C19orf47Q8N9M1 422 aaKnown RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 FAM57AQ8TBR7 257 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 ZDHHC19Q8WVZ1 309 aaPredicted RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 ZNF599Q96NL3 588 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 SECISBP2Q96T21 854 aaKnown RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 INSM2Q96T92 566 aaPredicted RBP9□□□□□ -0.97
NEDD1-211ENST00000557454 NRTNQ99748 197 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 CRB3Q9BUF7 120 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 PLEKHF2Q9H8W4 249 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 FANCLQ9NW38 375 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 FZD10Q9ULW2 581 aa9□□□□□ -0.97
NEDD1-211ENST00000557454 MATN2O00339 956 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 BTN3A3O00478 584 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 BTN3A1O00481 513 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 PEX11BO96011 259 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 ALBP02768 609 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 ITGAMP11215 1152 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 CYP11B1P15538 503 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 PTGER1P34995 402 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 GABRA4P48169 554 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 NUP107P57740 925 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 LRRC63Q05C16 580 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 ZNF33BQ06732 778 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 PMPCAQ10713 525 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 NFE2L1Q14494 772 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 ZIC1Q15915 447 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 SLC5A12Q1EHB4 618 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 TAF3Q5VWG9 929 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 TIGD7Q6NT04 549 aaPredicted RBP8.99□□□□□ -0.97
NEDD1-211ENST00000557454 CNSTQ6PJW8 725 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 TRIM73Q86UV7 250 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 PRSS58Q8IYP2 241 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 MSANTD4Q8NCY6 345 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 CPA5Q8WXQ8 436 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 TMEM125Q96AQ2 219 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 KCTD12Q96CX2 325 aaKnown RBP8.99□□□□□ -0.97
NEDD1-211ENST00000557454 C12orf66Q96MD2 445 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 CRACR2AQ9BSW2 395 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 NUP85Q9BW27 656 aa8.99□□□□□ -0.97
NEDD1-211ENST00000557454 SGPP1Q9BX95 441 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms