RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 IPMKQ8NFU5 416 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 OR52E1Q8NGJ3 308 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CPLX3Q8WVH0 158 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 N4BP2L2Q92802 583 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 PTERQ96BW5 349 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 OXNAD1Q96HP4 312 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 RBM41Q96IZ5 413 aaKnown RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 LINC00615Q96LM1 132 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 GBP5Q96PP8 586 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 FERD3LQ96RJ6 166 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 WDR77Q9BQA1 342 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CCM2Q9BSQ5 444 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 PACSIN1Q9BY11 444 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 XKR8Q9H6D3 395 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ASB8Q9H765 288 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ACTR10Q9NZ32 417 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 NDOR1Q9UHB4 597 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 NENFQ9UMX5 172 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 CDYLQ9Y232 598 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 HEBP2Q9Y5Z4 205 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 ARL5AQ9Y689 179 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 AP1M2Q9Y6Q5 423 aa8.73□□□□□ -1.01
HNRNPC-227ENST00000556897 SETD2Q9BYW2 2564 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 A0A1W2PQJ5 194 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 H3BMH7 237 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 AGPSO00116 658 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ZSCAN9O15535 394 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ALOX12BO75342 701 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 SRP72O76094 671 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 SERPINC1P01008 464 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 KRT1P04264 644 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 CTSBP07858 339 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 H2AFZP0C0S5 128 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 PYGMP11217 842 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 EDN3P14138 238 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ZFXP17010 805 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 CDC16Q13042 620 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 AIMP2Q13155 320 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 PRKG2Q13237 762 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ZIC1Q15915 447 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 RHBDD2Q6NTF9 364 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 CLEC17AQ6ZS10 378 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 H2AFVQ71UI9 128 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 TRIM73Q86UV7 250 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 FJX1Q86VR8 437 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 AMIGO1Q86WK6 493 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 VSIG1Q86XK7 387 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ADGRF3Q8IZF5 1079 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 C19orf47Q8N9M1 422 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 DNAJB14Q8TBM8 379 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 HM13Q8TCT9 377 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 PROKR1Q8TCW9 393 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 PPP4R1Q8TF05 950 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 TFB1MQ8WVM0 346 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 FAR1Q8WVX9 515 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 CTNNBL1Q8WYA6 563 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 DCUN1D1Q96GG9 259 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 CNDP1Q96KN2 507 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 BPIFA3Q9BQP9 254 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 HGH1Q9BTY7 390 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 FSD1LQ9BXM9 530 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 TFB2MQ9H5Q4 396 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 KLHL8Q9P2G9 620 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 DHCR7Q9UBM7 475 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 LCMT1Q9UIC8 334 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 FKBPLQ9UIM3 349 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 FBXL4Q9UKA2 621 aa8.72□□□□□ -1.01
HNRNPC-227ENST00000556897 MTORP42345 2549 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 SMTNL1A8MU46 457 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 IFRD1O00458 451 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 CD63P08962 238 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 RALBP11234 206 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 PECAM1P16284 738 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 UGT2B7P16662 529 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 PDHA2P29803 388 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 TSFMP43897 325 aaKnown RBP8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 GABRA4P48169 554 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 PRLHRP49683 370 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 ZBED6P86452 979 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 ZNF169Q14929 603 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 NKAIN1Q4KMZ8 207 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 AGAP7PQ5VUJ5 663 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 SARM1Q6SZW1 724 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 PID1Q7Z2X4 250 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 HOOK3Q86VS8 718 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 ZNF567Q8N184 647 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 OR4K2Q8NGD2 314 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 AGAP4Q96P64 663 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 FCRL5Q96RD9 977 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 AP1M1Q9BXS5 423 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 OR52A5Q9H2C5 316 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 FAM96AQ9H5X1 160 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 COG4Q9H9E3 785 aa8.71□□□□□ -1.02
HNRNPC-227ENST00000556897 SLC6A20Q9NP91 592 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms