RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SAMD4BQ5PRF9 694 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM240Q5SV17 173 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 VWA5B1Q5TIE3 1220 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 AGAP9Q5VTM2 703 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RWDD4Q6NW29 188 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ESRP1Q6NXG1 681 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CES3Q6UWW8 571 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 KIAA0408Q6ZU52 694 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ESPNLQ6ZVH7 1005 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 EFL1Q7Z2Z2 1120 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MAVSQ7Z434 540 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 GPR142Q7Z601 462 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DPP9Q86TI2 863 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM135Q86UB9 458 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SLC41A1Q8IVJ1 513 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SLC22A9Q8IVM8 553 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CCDC117Q8IWD4 279 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DSELQ8IZU8 1212 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PYROXD2Q8N2H3 581 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TMEM86AQ8N2M4 240 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CPSF7Q8N684 471 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TRIML2Q8N7C3 387 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TRPV1Q8NER1 839 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CEP70Q8NHQ1 597 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 KBTBD7Q8WVZ9 684 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 IRGQQ8WZA9 623 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PPWD1Q96BP3 646 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ASB9Q96DX5 294 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MYEOVQ96EZ4 313 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MPP4Q96JB8 637 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PPP1R36Q96LQ0 422 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SLC2A13Q96QE2 648 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 HNRNPABQ99729 332 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DDX50Q9BQ39 737 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 GATA5Q9BWX5 397 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MAGEB5Q9BZ81 275 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ULBP1Q9BZM6 244 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MTIF3Q9H2K0 278 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 POMKQ9H5K3 350 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 WDCPQ9H6R7 721 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 COPS7BQ9H9Q2 264 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CAB39LQ9H9S4 337 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MRM3Q9HC36 420 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ZBTB26Q9HCK0 441 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TXNRD2Q9NNW7 524 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PFDN4Q9NQP4 134 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 C8orf4Q9NR00 106 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MAN1C1Q9NR34 630 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PDGFCQ9NRA1 345 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PIGVQ9NUD9 493 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 OXSMQ9NWU1 459 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 UTP6Q9NYH9 597 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FLRT1Q9NZU1 646 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TBX21Q9UL17 535 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MAGED2Q9UNF1 606 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RUVBL2Q9Y230 463 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PSAT1Q9Y617 370 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 AP4B1Q9Y6B7 739 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 USP24Q9UPU5 2620 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MYO15AQ9UKN7 3530 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 SMIM28A0A1B0GU29 152 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 KLHL33A6NCF5 533 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 EPOPA6NHQ4 379 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 G3V2L1 256 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 H3BNX3 289 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PIRO00625 290 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 MRASO14807 208 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PPEF2O14830 753 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PHGDHO43175 533 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 DENRO43583 198 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 AP1G1O43747 822 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ZBTB14O43829 449 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PGM3O95394 542 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TIMP1P01033 207 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PIM1P11309 404 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 FCGR1AP12314 374 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 HNRNPLP14866 589 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 IL9P15248 144 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ATP6V1B1P15313 513 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 LAG3P18627 525 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 PAX3P23760 479 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 AKAP5P24588 427 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 EPHA3P29320 983 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 TKTP29401 623 aaKnown RBP4.36□□□□□ -1.71
ATXN3-241ENST00000556374 LRPAP1P30533 357 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ABCG1P45844 678 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 CPT1AP50416 773 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 ATP4BP51164 291 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 RPS6KA3P51812 740 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 THOP1P52888 689 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 NR1H2P55055 460 aa4.36□□□□□ -1.71
ATXN3-241ENST00000556374 NRG3P56975 720 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms