RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLX1AQ9BQ83 275 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 WDR77Q9BQA1 342 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 RIOK2Q9BVS4 552 aaKnown RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 HSD3B7Q9H2F3 369 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 NOD2Q9HC29 1040 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SLC40A1Q9NP59 571 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 KLC4Q9NSK0 619 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SUCOQ9UBS9 1254 aaKnown RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 DNAJC12Q9UKB3 198 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 AJAP1Q9UKB5 411 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 FZD10Q9ULW2 581 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SIK3Q9Y2K2 1263 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 CSAG2Q9Y5P2 127 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 MYOCOSA0A1B0GUC4 107 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 SYCE3A1L190 88 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 JRKO75564 520 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 PGLSO95336 258 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF8P17098 575 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 CTPS1P17812 591 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 OTX2P32243 289 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 HTR7P34969 479 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 HADHAP40939 763 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 PPP1R2P41236 205 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ARCN1P48444 511 aaKnown RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 STX17P56962 302 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 KCNK10P57789 538 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 PPP1CAP62136 330 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 UBE2HP62256 183 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 NOMO3P69849 1222 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 KRT85P78386 507 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 HSD11B2P80365 405 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 OTUD4Q01804 1114 aaKnown RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 TRAF2Q12933 501 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 GPR18Q14330 331 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ARMC12Q5T9G4 340 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 PRAMEF17Q5VTA0 474 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 TAF3Q5VWG9 929 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 NAA35Q5VZE5 725 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 B3GNTL1Q67FW5 361 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 FCRL6Q6DN72 434 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 KLHL10Q6JEL2 608 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 DUS1LQ6P1R4 473 aaKnown RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 SCYL2Q6P3W7 929 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 MTFR2Q6P444 385 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 XKRXQ6PP77 449 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 FAM198BQ6UWH4 519 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ABRAXAS1Q6UWZ7 409 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 TRIM72Q6ZMU5 477 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ARHGAP36Q6ZRI8 547 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 MRGPREQ86SM8 312 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 ARHGAP12Q8IWW6 846 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 RAVER1Q8IY67 606 aaKnown RBP6.67□□□□□ -1.34
ATXN3-236ENST00000556220 BCORP1Q8N888 145 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 JOSD2Q8TAC2 188 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 PPP4R1Q8TF05 950 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 NELFBQ8WX92 580 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 CPT1BQ92523 772 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 SMARCE1Q969G3 411 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 NUDCD1Q96RS6 583 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 CARD9Q9H257 536 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 OSGEPL1Q9H4B0 414 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 CLSTN2Q9H4D0 955 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 MCCC2Q9HCC0 563 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 SIX2Q9NPC8 291 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 SLC23A2Q9UGH3 650 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 GPR160Q9UJ42 338 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 AKAP6Q13023 2319 aa6.67□□□□□ -1.34
ATXN3-236ENST00000556220 BICDL2A1A5D9 508 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 GTPBP10A4D1E9 387 aaKnown RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 OR52A4PA6NMU1 304 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 PDZK1P1A8MUH7 402 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 C19orf84I3L1E1 186 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 DFFAO00273 331 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CCL21O00585 134 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 PEX12O00623 359 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 PCDH17O14917 1159 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 DNAJA2O60884 412 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 KLF7O75840 302 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 PDHA1P08559 390 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 KRT3P12035 628 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 BRAFP15056 766 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF30P17039 623 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 MMP8P22894 467 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 RPL10P27635 214 aaKnown RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 RFC1P35251 1148 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 HSPA9P38646 679 aaKnown RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 STC1P52823 247 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ART1P52961 327 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 AIF1P55008 147 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 TPI1P60174 286 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 RNF4P78317 190 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 TLE4Q04727 773 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 SLC10A7Q0GE19 358 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 CDC16Q13042 620 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF169Q14929 603 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 NCF4Q15080 339 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 GPR19Q15760 415 aa6.66□□□□□ -1.34
ATXN3-236ENST00000556220 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
ATXN3-236ENST00000556220 ASIC2Q16515 512 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms