RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ELMO3Q96BJ8 720 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TLCD1Q96CP7 247 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ERVK-6Q9BXR3 956 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 MOV10Q9HCE1 1003 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 MS4A12Q9NXJ0 267 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 PLK2Q9NYY3 685 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 P2RX2Q9UBL9 471 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SOCS5O75159 536 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TNFP01375 233 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RLN2P04090 185 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF12P17014 697 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF37AP17032 561 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 GNALP38405 381 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 DSC2Q02487 901 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 DLG2Q15700 870 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 WDR45BQ5MNZ6 344 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FSTL4Q6MZW2 842 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FAM47BQ8NA70 645 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 DCAF4L2Q8NA75 395 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 HMCESQ96FZ2 354 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 C12orf66Q96MD2 445 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC32A1Q9H598 525 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 C11orf49Q9H6J7 331 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 CHRAC1Q9NRG0 131 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FAM120CQ9NX05 1096 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 OGDHLQ9ULD0 1010 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF879B4DU55 563 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 STBD1O95210 358 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 KAT7O95251 611 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 CCR10P46092 362 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TAS2R43P59537 309 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RBM48Q5RL73 367 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FIP1L1Q6UN15 594 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 PRR23CQ6ZRP0 262 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 GLIS3Q8NEA6 775 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TSTD1Q8NFU3 115 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 OR2AP1Q8NGE2 309 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ADAMTS18Q8TE60 1221 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC9A6Q92581 669 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 UFD1Q92890 307 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 IRF7Q92985 503 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FATE1Q969F0 183 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RDH12Q96NR8 316 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 NODALQ96S42 347 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TMEM209Q96SK2 561 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 KAT8Q9H7Z6 458 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 PTPRHQ9HD43 1115 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC35C2Q9NQQ7 365 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RABL2AQ9UBK7 228 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SRRDQ9UH36 339 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RABL2BQ9UNT1 228 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SLC16A5O15375 505 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SH3BGRLO75368 114 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 METTL18O95568 372 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ADH1BP00325 375 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RBM34P42696 430 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 MPP1Q00013 466 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 UBAP2LQ14157 1087 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 DDI2Q5TDH0 399 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 FAM131AQ6UXB0 335 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 RASSF6Q6ZTQ3 369 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 KBTBD6Q86V97 674 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 P2RY8Q86VZ1 359 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 TSEN15Q8WW01 171 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 GEMIN6Q8WXD5 167 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 LPGAT1Q92604 370 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 LENG1Q96BZ8 264 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ZSWIM3Q96MP5 696 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF641Q96N77 438 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 MAPKAP1Q9BPZ7 522 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 GATA5Q9BWX5 397 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 LYARQ9NX58 379 aaKnown RBP10.54□□□□□ -0.72
ACTN1-216ENST00000556083 PFDN2Q9UHV9 154 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 NR2E1Q9Y466 385 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 N6AMT1Q9Y5N5 214 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
ACTN1-216ENST00000556083 COL1A1P02452 1464 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SOWAHBA6NEL2 793 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ORC5O43913 435 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 NOL4O94818 638 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 INHAP05111 366 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 PIRTP0C851 137 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 MPSTP25325 297 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SLC1A2P43004 574 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CLCN4P51793 760 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CAPZA1P52907 286 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 C1QTNF8P60827 252 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 GPR17Q13304 367 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ZIK1Q3SY52 487 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 GKN2Q86XP6 184 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SLITRK4Q8IW52 837 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 NARS2Q96I59 477 aaKnown RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SMAD5Q99717 465 aaKnown RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 DENND2DQ9H6A0 471 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ATP6AP2A0A1C7CYW4 349 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CXCR6O00574 342 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CCL16O15467 120 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 MSI1O43347 362 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms