RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FIP1L1Q6UN15 594 aaKnown RBP2.39□□□□□ -2.03
SRP54-207ENST00000555535 LINGO4Q6UY18 593 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 MARVELD2Q8N4S9 558 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 TSPYL6Q8N831 410 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 FRMD1Q8N878 549 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 ZNF519Q8TB69 540 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 TBC1D16Q8TBP0 767 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 MIPOL1Q8TD10 442 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 ELMOD3Q96FG2 381 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 SCLT1Q96NL6 688 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 USP28Q96RU2 1077 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 DDOQ99489 341 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 ARRDC1-AS1Q9H2J1 176 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 LUZP4Q9P127 313 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 TUBE1Q9UJT0 475 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 SLC13A4Q9UKG4 626 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 PPP1R3CQ9UQK1 317 aa2.39□□□□□ -2.03
SRP54-207ENST00000555535 A0A1W2PN81 502 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 A0A1W2PPH5 198 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 MED19A0JLT2 244 aaPredicted RBP2.38□□□□□ -2.03
SRP54-207ENST00000555535 PLEKHD1A6NEE1 506 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 MPTX1A8MV57 137 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 TO15178 435 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 MAGEC1O60732 1142 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 C22orf31O95567 290 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 XBP1P17861 261 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 NMBRP28336 390 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 BSGP35613 385 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 CHRNA7P36544 502 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 HUNKP57058 714 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 PRKCZQ05513 592 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 DMPKQ09013 629 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 EIF4A2Q14240 407 aaKnown RBP2.38□□□□□ -2.03
SRP54-207ENST00000555535 C15orf32Q32M92 178 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 WLSQ5T9L3 541 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 INTS11Q5TA45 600 aaKnown RBP2.38□□□□□ -2.03
SRP54-207ENST00000555535 ACSM2BQ68CK6 577 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 CFAP77Q6ZQR2 320 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 KCNMB4Q86W47 210 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 PARP8Q8N3A8 854 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 C17orf47Q8NEP4 570 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 C1orf74Q96LT6 269 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 PRICKLE1Q96MT3 831 aaPredicted RBP2.38□□□□□ -2.03
SRP54-207ENST00000555535 OR2A14Q96R47 310 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 NUDCD1Q96RS6 583 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 FNBP1Q96RU3 617 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 C1QTNF1Q9BXJ1 281 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 VN1R1Q9GZP7 353 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 RRP7BPQ9NSQ0 103 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 PAG1Q9NWQ8 432 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 MUTYHQ9UIF7 546 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 PNMA2Q9UL42 364 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 LYVE1Q9Y5Y7 322 aa2.38□□□□□ -2.03
SRP54-207ENST00000555535 A6NLC8 198 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 NDUFS4O43181 175 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 PEX14O75381 377 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 GH2P01242 217 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 CA6P23280 308 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 PAX9P55771 341 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 PLA2G7Q13093 441 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 FASTKD3Q14CZ7 662 aaKnown RBP2.37□□□□□ -2.03
SRP54-207ENST00000555535 MED22Q15528 200 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 PCGF3Q3KNV8 242 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 RARS2Q5T160 578 aaKnown RBP2.37□□□□□ -2.03
SRP54-207ENST00000555535 BTN2A1Q7KYR7 527 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 GALNT5Q7Z7M9 940 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 DIS3L2Q8IYB7 885 aaKnown RBP2.37□□□□□ -2.03
SRP54-207ENST00000555535 KIRREL3Q8IZU9 778 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 POM121L12Q8N7R1 296 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 RNF128Q8TEB7 428 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 FAM81BQ96LP2 452 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 HHATLQ9HCP6 504 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 SPHK2Q9NRA0 654 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 OSGIN1Q9UJX0 560 aa2.37□□□□□ -2.03
SRP54-207ENST00000555535 EXO1Q9UQ84 846 aaKnown RBP2.37□□□□□ -2.03
SRP54-207ENST00000555535 LRRFIP2Q9Y608 721 aaKnown RBP2.37□□□□□ -2.03
SRP54-207ENST00000555535 C15orf61A6NNL5 157 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 PHOX2AO14813 284 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 SCAMP1O15126 338 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 GPC4O75487 556 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 DFFBO76075 338 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 EIF2S1P05198 315 aaKnown RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 CASP6P55212 293 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 RPS3AP61247 264 aaKnown RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 POU5F1Q01860 360 aaKnown RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 GOLGA8DPQ0D2H9 430 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 BIRC3Q13489 604 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 TAF13Q15543 124 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 TBCEQ15813 527 aaPredicted RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 XKR3Q5GH77 459 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 MDH1BQ5I0G3 518 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 ETNPPLQ8TBG4 499 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 SMAP2Q8WU79 429 aaPredicted RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 ARHGAP45Q92619 1136 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 GNB4Q9HAV0 340 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 PREBQ9HCU5 417 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 ZNF701Q9NV72 531 aaPredicted RBP2.36□□□□□ -2.03
SRP54-207ENST00000555535 RHCGQ9UBD6 479 aa2.36□□□□□ -2.03
SRP54-207ENST00000555535 CRYL1Q9Y2S2 319 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms