RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PDXDC1Q6P996 788 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TMCO3Q6UWJ1 677 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 USP43Q70EL4 1123 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CCDC190Q86UF4 302 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NRROSQ86YC3 692 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CHERPQ8IWX8 916 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MCEMP1Q8IX19 187 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SCYL3Q8IZE3 742 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OR8H2Q8N162 312 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SCML4Q8N228 414 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PCDH20Q8N6Y1 951 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LSMEM1Q8N8F7 131 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 IL17RCQ8NAC3 791 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OR2AK2Q8NG84 335 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OR1J2Q8NGS2 313 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ELP5Q8TE02 316 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TMED6Q8WW62 240 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TAAR8Q969N4 342 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 RHBDF1Q96CC6 855 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ERP27Q96DN0 273 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PHF21BQ96EK2 531 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SCMH1Q96GD3 660 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MED30Q96HR3 178 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OR1F2PQ96R84 312 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CMKLR1Q99788 373 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SLF1Q9BQI6 1058 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CENPOQ9BU64 300 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM39BQ9GZU3 492 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PRO3102Q9H379 93 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OSGEPL1Q9H4B0 414 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PCDH9Q9HC56 1237 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TXLNGQ9NUQ3 528 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 OCIAD1Q9NX40 245 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MCM9Q9NXL9 1143 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 WNT16Q9UBV4 365 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 POLLQ9UGP5 575 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NRBP1Q9UHY1 535 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DBNLQ9UJU6 430 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ATP6V0A2Q9Y487 856 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LOXL2Q9Y4K0 774 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NFS1Q9Y697 457 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MAP1BP46821 2468 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ZFHX2Q9C0A1 2572 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 RIF1Q5UIP0 2472 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FREM2Q5SZK8 3169 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LTBP2Q14767 1821 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 IGLV5-37A0A075B6J1 123 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1W2PR77 199 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FAM90A26D6RGX4 464 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SH2B2O14492 632 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 P4HA2O15460 535 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KCNN4O15554 427 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 AVILO75366 819 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 RFPL2O75678 378 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NR2F1P10589 423 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MMP9P14780 707 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 UGT1A1P22309 533 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KRT20P35900 424 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 APOBEC1P41238 236 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LMAN1P49257 510 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 HSD17B4P51659 736 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 STAT2P52630 851 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PNLIPRP2P54317 469 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DSCR9P59020 149 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TAS2R38P59533 333 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PDE1BQ01064 536 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 EGR4Q05215 589 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CALD1Q05682 793 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MYBPHQ13203 477 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NFATC4Q14934 902 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DLG2Q15700 870 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 C15orf59Q2T9L4 293 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MYLK3Q32MK0 819 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 IGSF11Q5DX21 431 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 BMP2KLQ5H9B9 411 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 C9orf50Q5SZB4 431 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KRT79Q5XKE5 535 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 C18orf63Q68DL7 685 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 GPR139Q6DWJ6 353 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LCN10Q6JVE6 187 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FAM122CQ6P4D5 195 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PAPD4Q6PIY7 484 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 RHBDF2Q6PJF5 856 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 BRAT1Q6PJG6 821 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PRSS57Q6UWY2 283 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 CCNI2Q6ZMN8 369 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KIF6Q6ZMV9 814 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ARMC9Q7Z3E5 817 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ADGRA1Q86SQ6 560 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PRPF39Q86UA1 669 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 GPR180Q86V85 440 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KBTBD6Q86V97 674 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NR2C2APQ86WQ0 139 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DNAAF5Q86Y56 855 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LINC00346Q8IVM7 164 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF34Q8IZ26 560 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF114Q8NC26 417 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 APPL2Q8NEU8 664 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms