RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 UGT1A8Q9HAW9 530 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 BPIFA1Q9NP55 256 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 IL17CQ9P0M4 197 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ABI3Q9P2A4 366 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 IFT80Q9P2H3 777 aaPredicted RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ACSL5Q9ULC5 683 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 SCINQ9Y6U3 715 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 FN1P02751 2386 aaKnown RBP8.74□□□□□ -1.01
PRKCH-208ENST00000553846 ABCA4P78363 2273 aa8.74□□□□□ -1.01
PRKCH-208ENST00000553846 A0A1W2PQ72 361 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 KLHL33A6NCF5 533 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CCL21O00585 134 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 OR2B3O76000 313 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 NDST3O95803 873 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CD63P08962 238 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CD1EP15812 388 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 IGFBP2P18065 325 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 NDUFS1P28331 727 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 PIGHQ14442 188 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-208ENST00000553846 NKG7Q16617 165 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ATP13A4Q4VNC1 1196 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CT47A1Q5JQC4 288 aaPredicted RBP8.73□□□□□ -1.01
PRKCH-208ENST00000553846 FNBP1LQ5T0N5 605 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ARMC6Q6NXE6 501 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 MTFR2Q6P444 385 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 SPESP1Q6UW49 350 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ISLR2Q6UXK2 745 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 TRIM73Q86UV7 250 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 PLD5Q8N7P1 536 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 OR52E1Q8NGJ3 308 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 SPATA22Q8NHS9 363 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 LCN9Q8WX39 176 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 OLFM3Q96PB7 478 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 LMF1Q96S06 567 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 TMEM121Q9BTD3 319 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CEP41Q9BYV8 373 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ZCCHC2Q9C0B9 1178 aaKnown RBP8.73□□□□□ -1.01
PRKCH-208ENST00000553846 SLC25A51Q9H1U9 297 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 OR52A5Q9H2C5 316 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 CXXC4Q9H2H0 198 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 DLL4Q9NR61 685 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ACTR10Q9NZ32 417 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 SUCOQ9UBS9 1254 aaKnown RBP8.73□□□□□ -1.01
PRKCH-208ENST00000553846 LIMA1Q9UHB6 759 aaKnown RBP8.73□□□□□ -1.01
PRKCH-208ENST00000553846 MYO6Q9UM54 1294 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
PRKCH-208ENST00000553846 TRGV8A0A0C4DH27 118 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 LOC285095A0A1B0GVY8 99 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 FAM221AA4D161 298 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 GSAPA4D1B5 854 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 VSTM2BA6NLU5 285 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 AGAP14A8MT82 685 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 UNC5CO95185 931 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MT-CYBP00156 380 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 SLC35G4P0C7Q5 338 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 TPBGLP0DKB5 382 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MYBL1P10243 752 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MX2P20592 715 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 PBLDP30039 288 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 SPAM1P38567 509 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 PRKCIP41743 596 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 UBE2HP62256 183 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 TLE4Q04727 773 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 PRKAA1Q13131 559 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 ASIC2Q16515 512 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 CCDC122Q5T0U0 273 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 FKBP15Q5T1M5 1219 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 KDELC1Q6UW63 502 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 FAM151BQ6UXP7 276 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 GFRALQ6UXV0 394 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 Q6ZPB1 254 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 LINC00696Q6ZRV3 163 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 OVCH1Q7RTY7 1134 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 CHERPQ8IWX8 916 aaKnown RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 FAM20CQ8IXL6 584 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 GPR135Q8IZ08 494 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 DNAJC22Q8N4W6 341 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 OR1N1Q8NGS0 311 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MTFMTQ96DP5 389 aaKnown RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 OR2A14Q96R47 310 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 SRMSQ9H3Y6 488 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 HAUS4Q9H6D7 363 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MRM3Q9HC36 420 aaKnown RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 MRPL47Q9HD33 250 aaKnown RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 HAUS2Q9NVX0 235 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 CTSFQ9UBX1 484 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 NDOR1Q9UHB4 597 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
PRKCH-208ENST00000553846 ICKQ9UPZ9 632 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 COL6A5A8TX70 2615 aa8.72□□□□□ -1.01
PRKCH-208ENST00000553846 FBN1P35555 2871 aaKnown RBP8.71□□□□□ -1.01
PRKCH-208ENST00000553846 TRAV17A0A0B4J275 112 aa8.71□□□□□ -1.02
PRKCH-208ENST00000553846 GLYATL1P3A0A0U1RQE8 302 aa8.71□□□□□ -1.02
PRKCH-208ENST00000553846 C2orf74A8MZ97 194 aa8.71□□□□□ -1.02
PRKCH-208ENST00000553846 SLC19A2O60779 497 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms