RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 COG4Q9H9E3 785 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 IFT80Q9P2H3 777 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 NDOR1Q9UHB4 597 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 LRBAP50851 2863 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 CENPEQ02224 2701 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 C2orf74A8MZ97 194 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PRSS44E7EML9 344 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 AGPSO00116 658 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ZSCAN9O15535 394 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 KLHL41O60662 606 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 KRT38O76015 456 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 IGHEP01854 428 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 GYPCP04921 128 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PYGMP11217 842 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 TNNT1P13805 278 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ITGA3P26006 1051 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PDHA2P29803 388 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 SOX8P57073 446 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 DCDP81605 110 aaKnown RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PRKG2Q13237 762 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 MPP3Q13368 585 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ZNF658BQ4V348 819 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 SP5Q6BEB4 398 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 SARM1Q6SZW1 724 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 SPESP1Q6UW49 350 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 MFSD7Q6UXD7 560 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FJX1Q86VR8 437 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 AMIGO1Q86WK6 493 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 MCEMP1Q8IX19 187 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ZNF567Q8N184 647 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ZNF655Q8N720 491 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PROKR1Q8TCW9 393 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PPP4R1Q8TF05 950 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 PTERQ96BW5 349 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 DCUN1D1Q96GG9 259 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 CNDP1Q96KN2 507 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FCRL5Q96RD9 977 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FICDQ9BVA6 458 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FSD1LQ9BXM9 530 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 TFB2MQ9H5Q4 396 aaKnown RBP8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FAM96AQ9H5X1 160 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 SLC6A20Q9NP91 592 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 LCMT1Q9UIC8 334 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 CRLS1Q9UJA2 301 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 FBXL4Q9UKA2 621 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ICKQ9UPZ9 632 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 AP1M2Q9Y6Q5 423 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 POLEQ07864 2286 aa8.77□□□□□ -1.01
SYNE2-209ENST00000553308 ANKRD17O75179 2603 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 MDC1Q14676 2089 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 IFRD1O00458 451 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 AGTP01019 485 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 EDN3P14138 238 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 UGT2B7P16662 529 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 TSFMP43897 325 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 TMPRSS15P98073 1019 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 XIAPP98170 497 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 CDC16Q13042 620 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 AIMP2Q13155 320 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 OLIG2Q13516 323 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 BOP1Q14137 746 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 TAF1AQ15573 450 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 NKAIN1Q4KMZ8 207 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 PID1Q7Z2X4 250 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 ZC3H18Q86VM9 953 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 HOOK3Q86VS8 718 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 NXPE1Q8N323 547 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 OR13C4Q8NGS5 318 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 FAR1Q8WVX9 515 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 HAUS1Q96CS2 278 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 OR2A14Q96R47 310 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 APOL2Q9BQE5 337 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 GORASP1Q9BQQ3 440 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 AP1M1Q9BXS5 423 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 MVB12BQ9H7P6 319 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 SLC22A11Q9NSA0 550 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 SPHK1Q9NYA1 384 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 RSPH14Q9UHP6 348 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 LUC7L2Q9Y383 392 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 HYOU1Q9Y4L1 999 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 SEC16AO15027 2179 aa8.76□□□□□ -1.01
SYNE2-209ENST00000553308 DIDO1Q9BTC0 2240 aaKnown RBP8.76□□□□□ -1.01
SYNE2-209ENST00000553308 C17orf113A0A1B0GUU1 675 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 CCDC78A2IDD5 438 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 AGAP14A8MT82 685 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 CCL22O00626 93 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 SOCS6O14544 535 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 CST8O60676 142 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 STSP08842 583 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 CD63P08962 238 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 TMEM253P0C7T8 217 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 RALBP11234 206 aa8.75□□□□□ -1.01
SYNE2-209ENST00000553308 ATP1B2P14415 290 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms