RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PAPSS2O95340 614 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 PRKAR2AP13861 404 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 DNAJB13P59910 316 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 SMYD5Q6GMV2 418 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 CPNE9Q8IYJ1 553 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 KLHL36Q8N4N3 616 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 FBXL20Q96IG2 436 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 OR6C75A6NL08 312 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 STK25O00506 426 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 DNTTP04053 509 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 VARSP26640 1264 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 IL10RBQ08334 325 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 TLR1Q15399 786 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 DAW1Q8N136 415 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 PYROXD2Q8N2H3 581 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 UBE2J2Q8N2K1 259 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 LINC00471Q8N535 108 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 CXorf40AQ8TE69 158 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 EFHD2Q96C19 240 aaPredicted RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 POLR2J3Q9H1A7 115 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 MFSD1Q9H3U5 465 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 NECTIN3Q9NQS3 549 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 NUP50Q9UKX7 468 aa14.72□□□□□ -0.05
SMARCA4-207ENST00000541122 PIK3CBP42338 1070 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 SSR2P43308 183 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ASPAP45381 313 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ARSFP54793 590 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 MRPS6P82932 125 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 LDB1Q86U70 411 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 GALNT6Q8NCL4 622 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 CCDC107Q8WV48 283 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ADAM2Q99965 735 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 SYNDIG1Q9H7V2 258 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 AURKAO14965 403 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 RASAL1O95294 804 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 SMIM10L2AP0DMW4 78 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 SMIM10L2BP0DMW5 78 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 PRPS1L1P21108 318 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 RBM34P42696 430 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 CLCN4P51793 760 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 RGS8P57771 180 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ZNF431Q8TF32 576 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ZC3H10Q96K80 434 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 MCMBPQ9BTE3 642 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 GBA2Q9HCG7 927 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 THUMPD1Q9NXG2 353 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ADAMTS6Q9UKP5 1117 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ZNF806P0C7X5 589 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 CSTF1Q05048 431 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 TAF1AQ15573 450 aaPredicted RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 MSS51Q4VC12 460 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ZC3HC1Q86WB0 502 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 SLC37A3Q8NCC5 494 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 XAGE5Q8WWM1 108 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 BCL7BQ9BQE9 202 aa14.71□□□□□ -0.05
SMARCA4-207ENST00000541122 ENTPD6O75354 484 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 VNN1O95497 513 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 FGF3P11487 239 aaPredicted RBP14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 HCAR3P49019 387 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 HLCSP50747 726 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 RAET1GQ6H3X3 334 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 FAM171BQ6P995 826 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 ANKRD46Q86W74 232 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 RAVER1Q8IY67 606 aaKnown RBP14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 CLIP4Q8N3C7 705 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF248Q8NDW4 579 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 POF1BQ8WVV4 589 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 CAMK1GQ96NX5 476 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC6A15Q9H2J7 730 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 USP29Q9HBJ7 922 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 TVP23BQ9NYZ1 205 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 CMAHPQ9Y471 501 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 OR10H1Q9Y4A9 318 aa14.71□□□□□ -0.06
SMARCA4-207ENST00000541122 A0A0J9YVX5 310 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC9A3R1O14745 358 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TLR5O60602 858 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PIGRP01833 764 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 APOC1P02654 83 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 IL1R2P27930 398 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 GABARAPL2P60520 117 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 CTC1Q2NKJ3 1217 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PDE12Q6L8Q7 609 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TMPRSS11BQ86T26 416 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 LGI4Q8N135 537 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 OXR1Q8N573 874 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ACOT12Q8WYK0 555 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 C12orf66Q96MD2 445 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 DUSP26Q9BV47 211 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MAGEH1Q9H213 219 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF395Q9H8N7 513 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 RC3H2Q9HBD1 1191 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 TM9SF3Q9HD45 589 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 PLCL2Q9UPR0 1127 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 ZNF510Q9Y2H8 683 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 CNTNAP1P78357 1384 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 SLC9A3P48764 834 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 MPP2Q14168 576 aa14.7□□□□□ -0.06
SMARCA4-207ENST00000541122 C9orf64Q5T6V5 341 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms