RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HIST1H2ADP20671 130 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 RPIAP49247 311 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 PKNOX1P55347 436 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 SGCGQ13326 291 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 KANK2Q63ZY3 851 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 TMEM154Q6P9G4 183 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 VRK3Q8IV63 474 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 SLC22A15Q8IZD6 547 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 PLA2G15Q8NCC3 412 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 OR14C36Q8NHC7 312 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 ACTRT2Q8TDY3 377 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 SKA2Q8WVK7 121 aaPredicted RBP16.52■□□□□ 0.23
COPS3-212ENST00000539941 ASB12Q8WXK4 309 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 DNAJC9Q8WXX5 260 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 NSL1Q96IY1 281 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 HIST1H2AHQ96KK5 128 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 HIST1H2AJQ99878 128 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 H2AFJQ9BTM1 129 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 CCDC106Q9BWC9 280 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 NUSAP1Q9BXS6 441 aaKnown RBP16.52■□□□□ 0.23
COPS3-212ENST00000539941 TEX101Q9BY14 249 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 ZBTB26Q9HCK0 441 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 TNFRSF12AQ9NP84 129 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 SEMA4BQ9NPR2 832 aaPredicted RBP16.52■□□□□ 0.23
COPS3-212ENST00000539941 WWOXQ9NZC7 414 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 PDE10AQ9Y233 779 aa16.52■□□□□ 0.23
COPS3-212ENST00000539941 SDHDO14521 159 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 MATN4O95460 622 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 ESRRBO95718 433 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 PCCBP05166 539 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 T-ENOLP0DO92 83 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 TSPAN8P19075 237 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 AOC1P19801 751 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 PIK3CGP48736 1102 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 HNMTP50135 292 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 CDK3Q00526 305 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 BTKQ06187 659 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 MLF2Q15773 248 aaPredicted RBP16.51■□□□□ 0.23
COPS3-212ENST00000539941 LSM12Q3MHD2 195 aaKnown RBP16.51■□□□□ 0.23
COPS3-212ENST00000539941 HEATR4Q86WZ0 1026 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 HORMAD1Q86X24 394 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 TRAPPC5Q8IUR0 188 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 TP53I13Q8NBR0 393 aaPredicted RBP16.51■□□□□ 0.23
COPS3-212ENST00000539941 MCOLN3Q8TDD5 553 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 PPP1R14BQ96C90 147 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 PRR11Q96HE9 360 aaPredicted RBP16.51■□□□□ 0.23
COPS3-212ENST00000539941 MRGPRX1Q96LB2 322 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
COPS3-212ENST00000539941 OR52B2Q96RD2 323 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 CD244Q9BZW8 370 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 LRMDAQ9H2I8 198 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 LNPEPQ9UIQ6 1025 aa16.51■□□□□ 0.23
COPS3-212ENST00000539941 LOC730098B7Z3J9 87 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 SLC22A2O15244 555 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 TAPBPO15533 448 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 RNGTTO60942 597 aaKnown RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 PSIP1O75475 530 aaKnown RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 GUCA1CO95843 209 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ACADMP11310 421 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 EPHA3P29320 983 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ADSLP30566 484 aaPredicted RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 GGT5P36269 586 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 TRIM23P36406 574 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 IRF4Q15306 451 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 RBBP7Q16576 425 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 UGT3A2Q3SY77 523 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 GPRIN3Q6ZVF9 776 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CEP70Q8NHQ1 597 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 HM13Q8TCT9 377 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 PTCD3Q96EY7 689 aaKnown RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 SLC17A9Q9BYT1 436 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 SLC6A17Q9H1V8 727 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 WDR55Q9H6Y2 383 aaPredicted RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 PFDN4Q9NQP4 134 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ARL15Q9NXU5 204 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ARMCX1Q9P291 453 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 STOML1Q9UBI4 398 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 DUSP12Q9UNI6 340 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 DNMT3AQ9Y6K1 912 aaPredicted RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 A0A1W2PQU0 124 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 TMEM202A6NGA9 273 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 PPP6CO00743 305 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CRCPO75575 148 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CBX6O95503 412 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 JUNP05412 331 aaKnown RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 UROSP10746 265 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ZNF8P17098 575 aaPredicted RBP16.5■□□□□ 0.23
COPS3-212ENST00000539941 GTF2H2Q13888 395 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 GSTA3Q16772 222 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 FBXO48Q5FWF7 155 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 GTF2H2CQ6P1K8 395 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 ZNF852Q6ZMS4 543 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 GOLGA7Q7Z5G4 137 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 SYNPOQ8N3V7 929 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 OR2L2Q8NH16 312 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 FOPNLQ96NB1 174 aa16.5■□□□□ 0.23
COPS3-212ENST00000539941 CCT7Q99832 543 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms