RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LRRC70Q7Z2Q7 622 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 CBR4Q8N4T8 237 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 ASB11Q8WXH4 323 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 DGCR14Q96DF8 476 aaKnown RBP17.54■□□□□ 0.4
GNE-204ENST00000539208 BBS2Q9BXC9 721 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 RPF2Q9H7B2 306 aaKnown RBP17.54■□□□□ 0.4
GNE-204ENST00000539208 LRTM1Q9HBL6 345 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 FARSBQ9NSD9 589 aaKnown RBP17.54■□□□□ 0.4
GNE-204ENST00000539208 PNPLA3Q9NST1 481 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 HCFC1R1Q9NWW0 138 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 ARL15Q9NXU5 204 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 PKD2L2Q9NZM6 624 aa17.54■□□□□ 0.4
GNE-204ENST00000539208 ARHGAP10A1A4S6 786 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SAC3D1A6NKF1 404 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SLC16A5O15375 505 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KCNH1O95259 989 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KRT6AP02538 564 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KRT6BP04259 564 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 IL6P05231 212 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 PCSK2P16519 638 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 EPORP19235 508 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 AKT1P31749 480 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KRT6CP48668 564 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 HNMTP50135 292 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 DGKQP52824 942 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 OR4D2P58180 307 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 GGTA1PQ4G0N0 100 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 PLEKHS1Q5SXH7 462 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KIAA0907Q7Z7F0 614 aaPredicted RBP17.53■□□□□ 0.4
GNE-204ENST00000539208 ADIPOR2Q86V24 386 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 RGL4Q8IZJ4 473 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 CHST14Q8NCH0 376 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 OR2A12Q8NGT7 310 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SLC13A3Q8WWT9 602 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 PPM1MQ96MI6 270 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SLC24A3Q9HC58 644 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 COMMD3-BMI1R4GMX3 469 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 DLGAP1O14490 977 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 KPNA5O15131 536 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 ACOX3O15254 700 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 MOSPD3O75425 235 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 RASAL1O95294 804 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 ATP1B2P14415 290 aaPredicted RBP17.53■□□□□ 0.4
GNE-204ENST00000539208 SP140Q13342 867 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 IMPG1Q17R60 797 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 GLYATQ6IB77 296 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 ELMSAN1Q6PJG2 1045 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 MBOAT1Q6ZNC8 495 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 Q6ZVU0 165 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 UBE2R2Q712K3 238 aaPredicted RBP17.53■□□□□ 0.4
GNE-204ENST00000539208 OTOP2Q7RTS6 562 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SPHK2Q9NRA0 654 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 C1orf109Q9NX04 203 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 NEUROG3Q9Y4Z2 214 aa17.53■□□□□ 0.4
GNE-204ENST00000539208 SEC22BO75396 215 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 H6PDO95479 791 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 CYP2A6P11509 494 aaPredicted RBP17.52■□□□□ 0.4
GNE-204ENST00000539208 PTPN2P17706 415 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 NR1H2P55055 460 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 ROR2Q01974 943 aaKnown RBP17.52■□□□□ 0.4
GNE-204ENST00000539208 PTGR1Q14914 329 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 ARHGAP15Q53QZ3 475 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 NEK10Q6ZWH5 1172 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 GTF2H4Q92759 462 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 TCEAL4Q96EI5 215 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 NSMCE2Q96MF7 247 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 CCDC115Q96NT0 180 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 TCF25Q9BQ70 676 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 DPY30Q9C005 99 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 CLMPQ9H6B4 373 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 C11orf49Q9H6J7 331 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 OLAHQ9NV23 265 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 TBC1D14Q9P2M4 693 aa17.52■□□□□ 0.4
GNE-204ENST00000539208 FAM149AA5PLN7 773 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 GFYI3L273 518 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HIST1H2AGP0C0S8 130 aaPredicted RBP17.52■□□□□ 0.39
GNE-204ENST00000539208 TYRP14679 529 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HIST1H2ADP20671 130 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 SLC6A12P48065 614 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 DCDC1P59894 354 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HMGCS1Q01581 520 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 TEAD2Q15562 447 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 AAK1Q2M2I8 961 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 THEMIS2Q5TEJ8 643 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 RALGPS2Q86X27 583 aaPredicted RBP17.52■□□□□ 0.39
GNE-204ENST00000539208 LIX1Q8N485 282 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 METTL25Q8N6Q8 603 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.39
GNE-204ENST00000539208 DNAJB8Q8NHS0 232 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 OSCP1Q8WVF1 389 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HIST1H2AHQ96KK5 128 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HIST1H2AJQ99878 128 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 HAUS8Q9BT25 410 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 H2AFJQ9BTM1 129 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 ACTR8Q9H981 624 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 ZNF639Q9UID6 485 aa17.52■□□□□ 0.39
GNE-204ENST00000539208 USP22Q9UPT9 525 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms