RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 IFNEQ86WN2 208 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 VRK3Q8IV63 474 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 PACRGLQ8N7B6 248 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 BADQ92934 168 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 RAD9AQ99638 391 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 HAUS8Q9BT25 410 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 NTMT1Q9BV86 223 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 ALG2Q9H553 416 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 AGPAT4Q9NRZ5 378 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 PNPLA3Q9NST1 481 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 DUS2Q9NX74 493 aaKnown RBP13.1□□□□□ -0.31
VPS33B-202ENST00000535906 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 PDE10AQ9Y233 779 aa13.1□□□□□ -0.31
VPS33B-202ENST00000535906 POLR3HQ9Y535 204 aaPredicted RBP13.1□□□□□ -0.31
VPS33B-202ENST00000535906 LEFTY1O75610 366 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 STK16O75716 305 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 H6PDO95479 791 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 FGF19O95750 216 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 EPB42P16452 691 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 GSK3BP49841 420 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 KRT80Q6KB66 452 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 NANOGP8Q6NSW7 305 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 HSD11B1LQ7Z5J1 315 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 GRASPQ7Z6J2 395 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 TSPAN14Q8NG11 270 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 MUC13Q9H3R2 512 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 NANOGQ9H9S0 305 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ARL15Q9NXU5 204 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 KLQ9UEF7 1012 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ARPC2O15144 300 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 TLL1O43897 1013 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ANXA5P08758 320 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ATP1B2P14415 290 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 SLC2A4P14672 509 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 EPORP19235 508 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 POLR2EP19388 210 aaKnown RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 SOX11P35716 441 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 LIPEQ05469 1076 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 CAMK1Q14012 370 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 PRSS36Q5K4E3 855 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ZDHHC20Q5W0Z9 365 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 SERPINA13PQ6UXR4 307 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ALDH16A1Q8IZ83 802 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 TFAP2CQ92754 450 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 ULK4Q96C45 1275 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 HEPHQ9BQS7 1158 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 OLAHQ9NV23 265 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 TMEM45AQ9NWC5 275 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 KLHL42Q9P2K6 505 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 USP22Q9UPT9 525 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 MYRFQ9Y2G1 1151 aa13.09□□□□□ -0.31
VPS33B-202ENST00000535906 A0A1B0GTW7 788 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ARHGAP10A1A4S6 786 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 CCDC160A6NGH7 325 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 H3BNH8 94 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ULK1O75385 1050 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 CTSLP07711 333 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 EBLN1P0CF75 366 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 MTHFD1P11586 935 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 MSH3P20585 1137 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 AKT1P31749 480 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 DGKQP52824 942 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 RPL38P63173 70 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 GBX1Q14549 363 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 DMC1Q14565 340 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 SGO1Q5FBB7 561 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 METTL2BQ6P1Q9 378 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 Q6ZVL8 140 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 UBE2R2Q712K3 238 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 CHCHD4Q8N4Q1 142 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 SKA2Q8WVK7 121 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 MPP4Q96JB8 637 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 PKD2L2Q9NZM6 624 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ZNHIT2Q9UHR6 403 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 ZFC3H1O60293 1989 aaKnown RBP13.08□□□□□ -0.32
VPS33B-202ENST00000535906 A0A1W2PQ67 120 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 KRT87PA6NCN2 255 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 GPIP06744 558 aa13.08□□□□□ -0.32
VPS33B-202ENST00000535906 NCK1P16333 377 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms