RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 AP1M2Q9Y6Q5 423 aa7.78□□□□□ -1.16
CHFR-211ENST00000535897 ADGRG4Q8IZF6 3080 aa7.78□□□□□ -1.16
CHFR-211ENST00000535897 SVILO95425 2214 aa7.78□□□□□ -1.16
CHFR-211ENST00000535897 CCDC88CQ9P219 2028 aa7.78□□□□□ -1.16
CHFR-211ENST00000535897 ITPR3Q14573 2671 aa7.77□□□□□ -1.16
CHFR-211ENST00000535897 F8P00451 2351 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 SEC16AO15027 2179 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 A0A1W2PQJ5 194 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 C2orf81A6NN90 581 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 ZNF487B1APH4 448 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 CFAP99D6REC4 459 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 GOLGA6L22H0YM25 854 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 GAPDHSO14556 408 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 ZSCAN9O15535 394 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 ALOX12BO75342 701 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 SRP72O76094 671 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 EPOP01588 193 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 EDN3P14138 238 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 TPM4P67936 248 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 ZBED6P86452 979 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 TMPRSS15P98073 1019 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 AIMP2Q13155 320 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 NR1I3Q14994 352 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 PRKD1Q15139 912 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 SLC1A5Q15758 541 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 NKAIN1Q4KMZ8 207 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 BCL7AQ4VC05 210 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 AGAP7PQ5VUJ5 663 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 ZNF385CQ66K41 422 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 KAZNQ674X7 775 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 SP5Q6BEB4 398 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 SPESP1Q6UW49 350 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 FAM180AQ6UWF9 173 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 BZW1Q7L1Q6 419 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 PID1Q7Z2X4 250 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 FJX1Q86VR8 437 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 ZNF655Q8N720 491 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 C19orf47Q8N9M1 422 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 PHC3Q8NDX5 983 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 OR4K2Q8NGD2 314 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.77□□□□□ -1.172e-7■■■■■ 62.8
CHFR-211ENST00000535897 OXNAD1Q96HP4 312 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 MRGPRX2Q96LB1 330 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 AGAP4Q96P64 663 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 GBP4Q96PP9 640 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 COPS8Q99627 209 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 BARD1Q99728 777 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 BPIFA3Q9BQP9 254 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 NDC1Q9BTX1 674 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 PACSIN1Q9BY11 444 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 SPRTNQ9H040 489 aaPredicted RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 TFB2MQ9H5Q4 396 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 VPS37BQ9H9H4 285 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 ACTR10Q9NZ32 417 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 COPG2Q9UBF2 871 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 RSPH14Q9UHP6 348 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 FKBPLQ9UIM3 349 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 CDC23Q9UJX2 597 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 FBXL4Q9UKA2 621 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 LUC7L2Q9Y383 392 aaKnown RBP7.77□□□□□ -1.17
CHFR-211ENST00000535897 ARL5AQ9Y689 179 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 FER1L5A0AVI2 2057 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 NUP210LQ5VU65 1888 aa7.77□□□□□ -1.17
CHFR-211ENST00000535897 CCDC168Q8NDH2 2452 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 A0A1B0GUH1 482 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 C3orf70A6NLC5 250 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 AGPSO00116 658 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PECAM1P16284 738 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 ALAS2P22557 587 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 CD68P34810 354 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 NR2C2P49116 596 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PRLHRP49683 370 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 WASHC5Q12768 1159 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 MPP3Q13368 585 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 TFDP2Q14188 446 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 ZNF169Q14929 603 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 ZXDCQ2QGD7 858 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 CRB2Q5IJ48 1285 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PRAMEF13Q5VWM6 474 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 RHBDD2Q6NTF9 364 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 LINC00696Q6ZRV3 163 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 VSIG1Q86XK7 387 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PARP9Q8IXQ6 854 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PROKR1Q8TCW9 393 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 PPP4R1Q8TF05 950 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 FAR1Q8WVX9 515 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 P3H4Q92791 437 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 ULK4Q96C45 1275 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 HAUS1Q96CS2 278 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 LINC00615Q96LM1 132 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 MAGEB10Q96LZ2 347 aaPredicted RBP7.76□□□□□ -1.17
CHFR-211ENST00000535897 FICDQ9BVA6 458 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 FAM96AQ9H5X1 160 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 EPS8L2Q9H6S3 715 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 MVB12BQ9H7P6 319 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 COG4Q9H9E3 785 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 FAM60AQ9NP50 221 aa7.76□□□□□ -1.17
CHFR-211ENST00000535897 SLC6A20Q9NP91 592 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms