RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OR4E2Q8NGC2 313 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 OR5K2Q8NHB8 316 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 GSDMBQ8TAX9 411 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 LCN9Q8WX39 176 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 KCNJ9Q92806 393 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 SLC30A3Q99726 388 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 AARSD1Q9BTE6 412 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 TRIT1Q9H3H1 467 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 PPANQ9NQ55 473 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 ZDHHC18Q9NUE0 388 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 AKAP7Q9P0M2 348 aaPredicted RBP22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 KLHL42Q9P2K6 505 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 DMGDHQ9UI17 866 aaKnown RBP22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 KIF26BQ2KJY2 2108 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 OR6C74A6NCV1 312 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 TNFSF15O95150 251 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 AHSGP02765 367 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 ANKRD34CP0C6C1 535 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 CCL4P13236 92 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 ITIH1P19827 911 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 ETV5P41161 510 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 MLLT3P42568 568 aaPredicted RBP22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 MGAT5Q09328 741 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 TBC1D25Q3MII6 688 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 IRGCQ6NXR0 463 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 OOSP2Q86WS3 158 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 SPNS2Q8IVW8 549 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 ZBTB2Q8N680 514 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 GIMAP7Q8NHV1 300 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 ZDHHC12Q96GR4 267 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 CCDC68Q9H2F9 335 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 HRASLS2Q9NWW9 162 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 PISDQ9UG56 409 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 COMMD10Q9Y6G5 202 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 WDFY3Q8IZQ1 3526 aa22.09■■□□□ 1.13
SFSWAP-204ENST00000535399 CDRT15L2A8MXV6 281 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 E5RI56 91 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 KIF1CO43896 1103 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ITGA2BP08514 1039 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 JMJD7P0C870 316 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 TPBGLP0DKB5 382 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 RBMS1P29558 406 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ATP5DP30049 168 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 CSTF2P33240 577 aaKnown RBP eCLIP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 GLE1Q53GS7 698 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ACSBG2Q5FVE4 666 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 UNC5DQ6UXZ4 953 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 PRSS42Q7Z5A4 293 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 PROSER1Q86XN7 944 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 SIDT2Q8NBJ9 832 aaKnown RBP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 CFAP61Q8NHU2 1237 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ZNF578Q96N58 590 aaPredicted RBP22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 SRMSQ9H3Y6 488 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 XKR8Q9H6D3 395 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 SEMA5BQ9P283 1151 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 POLG2Q9UHN1 485 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ICKQ9UPZ9 632 aa22.08■■□□□ 1.13
SFSWAP-204ENST00000535399 ACACAQ13085 2346 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 TOX3O15405 576 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 TLX3O43711 291 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 FGF3P11487 239 aaPredicted RBP22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 SSTR1P30872 391 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 ABCG1P45844 678 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 ERVPABLB-1P60509 514 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 TIAL1Q01085 375 aaKnown RBP eCLIP22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 CAPN12Q6ZSI9 719 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 FAM92BQ6ZTR7 304 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 AMIGO1Q86WK6 493 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 PALM2Q8IXS6 379 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 NDNQ99608 321 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 GPR21Q99679 349 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 OCIAD1Q9NX40 245 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 ZMIZ1Q9ULJ6 1067 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 TDRKHQ9Y2W6 561 aaKnown RBP22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 DHRS7Q9Y394 339 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 NFS1Q9Y697 457 aa22.07■■□□□ 1.12
SFSWAP-204ENST00000535399 EPG5Q9HCE0 2579 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 BTN3A3O00478 584 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 POLR2CP19387 275 aaPredicted RBP22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 GPX6P59796 221 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 RBM20Q5T481 1227 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 CACHD1Q5VU97 1274 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 CLEC14AQ86T13 490 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 CCDC25Q86WR0 208 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 DCUN1D3Q8IWE4 304 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 BMPERQ8N8U9 685 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 CD200R1Q8TD46 325 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 CD180Q99467 661 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 ZNF768Q9H5H4 540 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 FAM114A2Q9NRY5 505 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 THSD1Q9NS62 852 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 PLAGL1Q9UM63 463 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 RUVBL2Q9Y230 463 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 PSAT1Q9Y617 370 aa22.06■■□□□ 1.12
SFSWAP-204ENST00000535399 EFCAB7A8K855 629 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 B4E171 279 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 BTN3A1O00481 513 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 RASSF9O75901 435 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 MATN4O95460 622 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 RPN2P04844 631 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms