RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 FAM92BQ6ZTR7 304 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 STRA8Q7Z7C7 330 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 TAX1BP1Q86VP1 789 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 WDR48Q8TAF3 677 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 SKA2Q8WVK7 121 aaPredicted RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 ASZ1Q8WWH4 475 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 IL17FQ96PD4 163 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 FMO2Q99518 471 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 CDC42EP4Q9H3Q1 356 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 VPS9D1Q9Y2B5 631 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
VPS11-205ENST00000534551 SDK2Q58EX2 2172 aa13.64□□□□□ -0.23
VPS11-205ENST00000534551 DMXL2Q8TDJ6 3036 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 FAM159BA6NKW6 160 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 H3BMM5 538 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 BTN3A3O00478 584 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 BTN3A1O00481 513 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 CAPN5O15484 640 aaPredicted RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 FAM155BO75949 473 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 MYBL2P10244 700 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 MCM3P25205 808 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 GMPRP36959 345 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 LIMK2P53671 638 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 GRB7Q14451 532 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 KLHL38Q2WGJ6 581 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 KBTBD12Q3ZCT8 623 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 PLEKHS1Q5SXH7 462 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 HECTD2Q5U5R9 776 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 UNQ6494/PRO21346Q6UXR6 183 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 C3orf62Q6ZUJ4 267 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 PIWIL4Q7Z3Z4 852 aaKnown RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 ZC3HC1Q86WB0 502 aaKnown RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 OR4E2Q8NGC2 313 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 OR4D9Q8NGE8 314 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 FBF1Q8TES7 1133 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 KCNJ9Q92806 393 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 TRIT1Q9H3H1 467 aaKnown RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 MTRF1LQ9UGC7 380 aaKnown RBP13.63□□□□□ -0.23
VPS11-205ENST00000534551 LOXL2Q9Y4K0 774 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 HEBP2Q9Y5Z4 205 aa13.63□□□□□ -0.23
VPS11-205ENST00000534551 FAM95CA0A1B0GW59 222 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 OR6C74A6NCV1 312 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 OR5K3A6NET4 321 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 BRINP1O60477 761 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 ACSL3O95573 720 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 FAM153BP0C7A2 387 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 POLR2CP19387 275 aaPredicted RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 SAT1P21673 171 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 FDXRP22570 491 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 NDUFS1P28331 727 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 PEBP1P30086 187 aaKnown RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 KYNUQ16719 465 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 FAM153CQ494X1 144 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 GALNT7Q86SF2 657 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 CTAGE3PQ8IX95 158 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 RBM12BQ8IXT5 1001 aaKnown RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 C2orf73Q8N5S3 287 aaPredicted RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 OR5K2Q8NHB8 316 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 LCN9Q8WX39 176 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 NXPE2Q96DL1 559 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 MRRFQ96E11 262 aaKnown RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 PRR11Q96HE9 360 aaPredicted RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 VPS39Q96JC1 886 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 ELMO2Q96JJ3 720 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 TMEM74Q96NL1 305 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 MCMBPQ9BTE3 642 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 MENTQ9BUN1 341 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS11-205ENST00000534551 TRMT6Q9UJA5 497 aaKnown RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 COLEC10Q9Y6Z7 277 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
VPS11-205ENST00000534551 PCM1Q15154 2024 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 APC2O95996 2303 aa13.62□□□□□ -0.23
VPS11-205ENST00000534551 CCDC187A0A096LP49 1063 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 GSAPA4D1B5 854 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 ARHGEF33A8MVX0 844 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 VPS26AO75436 327 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 CCL4P13236 92 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 STX2P32856 288 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SEPHS1P49903 392 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 KPNA2P52292 529 aaKnown RBP13.61□□□□□ -0.23
VPS11-205ENST00000534551 CYP4F3Q08477 520 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SQSTM1Q13501 440 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 WDR74Q6RFH5 385 aaPredicted RBP13.61□□□□□ -0.23
VPS11-205ENST00000534551 PAQR3Q6TCH7 311 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 RAB11FIP2Q7L804 512 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 SLC26A11Q86WA9 606 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 OOSP2Q86WS3 158 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 DCUN1D3Q8IWE4 304 aa13.61□□□□□ -0.23
VPS11-205ENST00000534551 FAM20CQ8IXL6 584 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms