RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FGF22Q9HCT0 170 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 LATS2Q9NRM7 1088 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 TM7SF3Q9NS93 570 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 GPR34Q9UPC5 381 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 SLC17A4Q9Y2C5 497 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 FIS1Q9Y3D6 152 aa18.1■□□□□ 0.49
SMPD1-208ENST00000533123 ANKRD12Q6UB98 2062 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 SERPINA6P08185 405 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 HOXC4P09017 264 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-208ENST00000533123 SERPINB5P36952 375 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 HK3P52790 923 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 THOP1P52888 689 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 KIAA1024LP59773 190 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 YPEL5P62699 121 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 PDCD2Q16342 344 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-208ENST00000533123 ACSBG2Q5FVE4 666 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 C11orf96Q7Z7L8 435 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 CUZD1Q86UP6 607 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 SLC22A18ASQ8N1D0 253 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 LILRA3Q8N6C8 439 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-208ENST00000533123 NSUN5Q96P11 429 aaKnown RBP18.09■□□□□ 0.49
SMPD1-208ENST00000533123 OR52B2Q96RD2 323 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 DUSP15Q9H1R2 295 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-208ENST00000533123 FBXO4Q9UKT5 387 aa18.09■□□□□ 0.49
SMPD1-208ENST00000533123 CAPN14A8MX76 684 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 SCAMP1O15126 338 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 CCDC22O60826 627 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 POP7O75817 140 aaKnown RBP18.08■□□□□ 0.49
SMPD1-208ENST00000533123 HTR1BP28222 390 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 RABIFP47224 123 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 LAYNQ6UX15 382 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 LRRTM4Q86VH4 590 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 RGL4Q8IZJ4 473 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 FBXO39Q8N4B4 442 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 OR56A4Q8NGH8 313 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 PTCD3Q96EY7 689 aaKnown RBP18.08■□□□□ 0.49
SMPD1-208ENST00000533123 SAR1AQ9NR31 198 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 UTP6Q9NYH9 597 aaKnown RBP18.08■□□□□ 0.49
SMPD1-208ENST00000533123 SUFUQ9UMX1 484 aa18.08■□□□□ 0.49
SMPD1-208ENST00000533123 PRR5-ARHGAP8B1AHC4 643 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 E9PBE3 544 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 PPP6CO00743 305 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 MGRN1O60291 552 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 KLHL41O60662 606 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 THEGLP0DJG4 465 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 EPHA3P29320 983 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 ARHGAP8P85298 464 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 SLC7A6OSQ96CW6 309 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-208ENST00000533123 CCDC106Q9BWC9 280 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 SLC23A2Q9UGH3 650 aa18.08■□□□□ 0.48
SMPD1-208ENST00000533123 PNMA8BQ9ULN7 279 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-208ENST00000533123 GPR89AB7ZAQ6 455 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 TNFRSF10AO00220 468 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 GPR89BP0CG08 455 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 EEF1DP29692 281 aaKnown RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 AGTR2P50052 363 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 TTLL9Q3SXZ7 439 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 LPCAT2Q7L5N7 544 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CHST15Q7LFX5 561 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 RD3Q7Z3Z2 195 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 VRK3Q8IV63 474 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CFAP206Q8IYR0 622 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 GAB3Q8WWW8 586 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 TSACCQ96A04 125 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 PDXPQ96GD0 296 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 LINC00615Q96LM1 132 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 WDR92Q96MX6 357 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 FAM126AQ9BYI3 521 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 SPAG17Q6Q759 2223 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CCDC189A1A4V9 331 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 PRSS38A1L453 326 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 SYCE1LA8MT33 242 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 HRO43593 1189 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 ATP5HO75947 161 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 ENO1P06733 434 aaKnown RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 KELP23276 732 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 DGKAP23743 735 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 KRT72Q14CN4 511 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 FAM91A1Q658Y4 838 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 RAB44Q7Z6P3 723 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 GPSM1Q86YR5 675 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 ASZ1Q8WWH4 475 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 OR1E3Q8WZA6 343 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 KLHDC7BQ96G42 594 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 NSL1Q96IY1 281 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 LRMDAQ9H2I8 198 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CARS2Q9HA77 564 aaKnown RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 EML4Q9HC35 981 aaKnown RBP18.07■□□□□ 0.48
SMPD1-208ENST00000533123 C11orf16Q9NQ32 467 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 CDYLQ9Y232 598 aa18.07■□□□□ 0.48
SMPD1-208ENST00000533123 KPNA5O15131 536 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 SKAP2O75563 359 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 WNT1P04628 370 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 GNPDA1P46926 289 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 PREPP48147 710 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 HK2P52789 917 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 NFE2L1Q14494 772 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 PYCR3Q53H96 274 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms