RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PRAMEF11O60813 436 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PAK4O96013 591 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PFKLP17858 780 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 KIR3DL1P43629 444 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 TAS2R41P59536 307 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 EMC10Q5UCC4 262 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 AAGABQ6PD74 315 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 TWIST2Q8WVJ9 160 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 C1orf74Q96LT6 269 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 WDR92Q96MX6 357 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NPAS2Q99743 824 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 WDR55Q9H6Y2 383 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 VRTNQ9H8Y1 702 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 GPR34Q9UPC5 381 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 LOC100506127A0A0U1RQW1 187 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CCDC162PA2VCL2 907 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ANKRD66B4E2M5 251 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 GRID2O43424 1007 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CCKBRP32239 447 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 KCNJ2P63252 427 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PLGLB1Q02325 96 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RALGDSQ12967 914 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ELAVL3Q14576 367 aaKnown RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 SIRPB2Q5JXA9 342 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 KIAA0930Q6ICG6 404 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-221ENST00000532331 RTL10Q7L3V2 364 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF540Q8NDQ6 660 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 CLHC1Q8NHS4 586 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PMEPA1Q969W9 287 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 NPY6RQ99463 290 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
PTPRK-221ENST00000532331 PTGESO14684 152 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 KRT36O76013 467 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 IL6P05231 212 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 RPL10P27635 214 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CXCL12P48061 93 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 PLA2G16P53816 162 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 LGALS3BPQ08380 585 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CYP4F3Q08477 520 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 SERINC3Q13530 473 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ARHGAP40Q5TG30 622 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ANKRD22Q5VYY1 191 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 DRICH1Q6PGQ1 229 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 POMZP3Q6PJE2 187 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CAMKVQ8NCB2 501 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 AGAP11Q8TF27 550 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 RIT1Q92963 219 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF624Q9P2J8 865 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 TRPS1Q9UHF7 1281 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 DNASE1L2Q92874 299 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 MKL2Q9ULH7 1088 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 MGRN1O60291 552 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 GSRP00390 522 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ZNF37AP17032 561 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 PTDSS1P48651 473 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 KLF10Q13118 480 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 SLC1A5Q15758 541 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 GK5Q6ZS86 529 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 SFRP1Q8N474 314 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 IL22RA1Q8N6P7 574 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 OR4E2Q8NGC2 313 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 C7orf26Q96N11 449 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 FEM1AQ9BSK4 669 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 RETREG1Q9H6L5 497 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 PNO1Q9NRX1 252 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CLCA3PQ9Y6N3 262 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ATXN2Q99700 1313 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 C5P01031 1676 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 NHSQ6T4R5 1651 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 A0A1W2PQU0 124 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ENTPD5O75356 428 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 STC2O76061 302 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 NRG3P56975 720 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CLCQ05315 142 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 KCTD19Q17RG1 926 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 NDUFAF6Q330K2 333 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 PPM1JQ5JR12 505 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 B4GALT6Q9UBX8 382 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 OGDHLQ9ULD0 1010 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CFAP20Q9Y6A4 193 aaKnown RBP11.1□□□□□ -0.63
PTPRK-221ENST00000532331 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
PTPRK-221ENST00000532331 MFN2O95140 757 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 LCP2Q13094 533 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 AMIGO2Q86SJ2 522 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TSPAN14Q8NG11 270 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms