RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TRAPPC9Q96Q05 1148 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 FERMT1Q9BQL6 677 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 NLNQ9BYT8 704 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 TRIM5Q9C035 493 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 FAM60AQ9NP50 221 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 CASS4Q9NQ75 786 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 LATS2Q9NRM7 1088 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 ACTR10Q9NZ32 417 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 TDRKHQ9Y2W6 561 aaKnown RBP14.95□□□□□ -0.02
MRPS28-209ENST00000522987 PCDHGA9Q9Y5G4 932 aaKnown RBP14.95□□□□□ -0.02
MRPS28-209ENST00000522987 PRSS21Q9Y6M0 314 aa14.95□□□□□ -0.02
MRPS28-209ENST00000522987 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 KRT86O43790 486 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 SORBS2O94875 1100 aaKnown RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 CBSLP0DN79 551 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 ACRV1P26436 265 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 CBSP35520 551 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 VAV2P52735 878 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 CSE1LP55060 971 aaKnown RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 INPP5JQ15735 1006 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 EIF2S3LQ2VIR3 472 aaKnown RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 MLIPQ5VWP3 458 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 JMJD6Q6NYC1 403 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 AMIGO1Q86WK6 493 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 LURAP1LQ8IV03 231 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 FAM20CQ8IXL6 584 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 PIANPQ8IYJ0 282 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 ADGRF3Q8IZF5 1079 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 LMNTD1Q8N9Z9 388 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 Q8NA96 180 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 GALNT11Q8NCW6 608 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 ALG3Q92685 438 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 TFGQ92734 400 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 N4BP2L2Q92802 583 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 SPRTNQ9H040 489 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 MLXIPLQ9NP71 852 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 SMARCAL1Q9NZC9 954 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 PLEKHB1Q9UF11 243 aaPredicted RBP14.94□□□□□ -0.02
MRPS28-209ENST00000522987 CIDEBQ9UHD4 219 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 SERTAD3Q9UJW9 196 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 ICKQ9UPZ9 632 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 ZNF451Q9Y4E5 1061 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 MAP4K5Q9Y4K4 846 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 PCDHA3Q9Y5H8 950 aa14.94□□□□□ -0.02
MRPS28-209ENST00000522987 C2orf74A8MZ97 194 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 E7EQ34 232 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 METTL18O95568 372 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 RAB40ALP0C0E4 278 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 PYGMP11217 842 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 HADHAP40939 763 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 COPS2P61201 443 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 NCF4Q15080 339 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 ZIC1Q15915 447 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 DBN1Q16643 649 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 ZNF658BQ4V348 819 aaPredicted RBP14.93□□□□□ -0.02
MRPS28-209ENST00000522987 CCDC38Q502W7 563 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 SLC6A19Q695T7 634 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 SARM1Q6SZW1 724 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 ARHGEF18Q6ZSZ5 1173 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 HOOK3Q86VS8 718 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 RBMXL3Q8N7X1 1067 aaKnown RBP14.93□□□□□ -0.02
MRPS28-209ENST00000522987 FAM71DQ8N9W8 422 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 LRFN5Q96NI6 719 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 SLAMF7Q9NQ25 335 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 IRAK4Q9NWZ3 460 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 SPHK1Q9NYA1 384 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 GPR83Q9NYM4 423 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 IMPACTQ9P2X3 320 aa14.93□□□□□ -0.02
MRPS28-209ENST00000522987 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
MRPS28-209ENST00000522987 IGLV3-16A0A075B6K0 115 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 KLHL33A6NCF5 533 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 C9J4A7 227 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 MATN2O00339 956 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 MAP3K7O43318 606 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 PTMAP06454 111 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 UGT2B7P16662 529 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 CYLC1P35663 651 aaPredicted RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 RWDD2BP57060 319 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 BOP1Q14137 746 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 ZNF449Q6P9G9 518 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 SPESP1Q6UW49 350 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 CARFQ8N187 725 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 C19orf47Q8N9M1 422 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 PRR7Q8TB68 274 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 ELMO1Q92556 727 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 PITPNM3Q9BZ71 974 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 TFB2MQ9H5Q4 396 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 MVB12BQ9H7P6 319 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 NLE1Q9NVX2 485 aaPredicted RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 DHCR7Q9UBM7 475 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 CDYLQ9Y232 598 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 ASF1AQ9Y294 204 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 KLHL20Q9Y2M5 609 aa14.92□□□□□ -0.02
MRPS28-209ENST00000522987 PTRH2Q9Y3E5 179 aaKnown RBP14.92□□□□□ -0.02
MRPS28-209ENST00000522987 PCM1Q15154 2024 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms