RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HOPXQ9BPY8 73 aaPredicted RBP11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 TTYH3Q9C0H2 523 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 EXD2Q9NVH0 621 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 NKIRAS2Q9NYR9 191 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 MAGEL2Q9UJ55 1249 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 RAI2Q9Y5P3 530 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 SPEF2Q9C093 1822 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 SYN3O14994 580 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 PGAM2P15259 253 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 FSHRP23945 695 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 AQP4P55087 323 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 RHEBQ15382 184 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 AP5B1Q2VPB7 878 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 ARMC10Q8N2F6 343 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 RIT1Q92963 219 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 TAPBPLQ9BX59 468 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 ARL8BQ9NVJ2 186 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
ERGIC1-208ENST00000520399 REM1O75628 298 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 LRATO95237 230 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ASPAP45381 313 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 TSPAN5P62079 268 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 LRP8Q14114 963 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ZNF234Q14588 700 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ALG1LQ6GMV1 187 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 TRIM40Q6P9F5 258 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 CORO6Q6QEF8 472 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SPESP1Q6UW49 350 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ANKRD13BQ86YJ7 626 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 CPA6Q8N4T0 437 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 OR6K2Q8NGY2 324 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ZNF420Q8TAQ5 688 aaPredicted RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 STYXQ8WUJ0 223 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SGK2Q9HBY8 427 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 RPH3AQ9Y2J0 694 aaPredicted RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ZFP37Q9Y6Q3 630 aaPredicted RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 UGT2B17O75795 530 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 DCKP27707 260 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 GNALP38405 381 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 MED22Q15528 200 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 CPSF6Q16630 551 aaKnown RBP eCLIP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 CLVS2Q5SYC1 327 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 RNASEH2BQ5TBB1 312 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 GK5Q6ZS86 529 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 PPCDCQ96CD2 204 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SLC27A6Q9Y2P4 619 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 PRR5-ARHGAP8B1AHC4 643 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 AGPSO00116 658 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SLC22A1O15245 554 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 CCL16O15467 120 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SPAM1P38567 509 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 HADHBP55084 474 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 RPP38P78345 283 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ARHGAP8P85298 464 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 C6orf52Q5T4I8 152 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SLC25A25Q6KCM7 469 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 NAT16Q8N8M0 369 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 HCAR2Q8TDS4 363 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 PPM1BO75688 479 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ELNP15502 786 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 TCEA1P23193 301 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ETV3P41162 512 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 PTGIRP43119 386 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 MASP1P48740 699 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 NDST2P52849 883 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 RASGEF1BQ0VAM2 473 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 NOL11Q9H8H0 719 aaKnown RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 SEMA3GQ9NS98 782 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ZNF490Q9ULM2 529 aaPredicted RBP11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 IFT52Q9Y366 437 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 ROBO1Q9Y6N7 1651 aa11.92□□□□□ -0.5
ERGIC1-208ENST00000520399 C2orf71A6NGG8 1288 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 ISM1B1AKI9 464 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 CACNB4O00305 520 aaPredicted RBP11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 TBX1O43435 398 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 CD48P09326 243 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 GBE1Q04446 702 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 NIPAL4Q0D2K0 466 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 MAB21L1Q13394 359 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 OR4K2Q8NGD2 314 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 METTL21AQ8WXB1 218 aa11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 SSU72Q9NP77 194 aaKnown RBP11.91□□□□□ -0.5
ERGIC1-208ENST00000520399 ASF1AQ9Y294 204 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms