RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TTLL6Q8N841 843 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF366Q8N895 744 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF781Q8N8C0 355 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 C2orf69Q8N8R5 385 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATG16L2Q8NAA4 619 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM52Q8NDY8 209 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRPV1Q8NER1 839 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 NUP43Q8NFH3 380 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR13J1Q8NGT2 312 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MCFD2Q8NI22 146 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF461Q8TAF7 563 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC35G2Q8TBE7 412 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PHOSPHO2Q8TCD6 241 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TAS1R2Q8TE23 839 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DDX1Q92499 740 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SHC3Q92529 594 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATOH1Q92858 354 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 KIAA1191Q96A73 305 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 OTULINQ96BN8 352 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 NXNL1Q96CM4 212 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCDC124Q96CT7 223 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ASB9Q96DX5 294 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM89AQ96GI7 184 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 VCPIP1Q96JH7 1222 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CSPG4P5Q96PW8 444 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CRAMP1Q96RY5 1269 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 JMJD8Q96S16 334 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TBCBQ99426 244 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PKP2Q99959 881 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZSWIM1Q9BR11 485 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZPBPQ9BS86 351 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 C1QTNF1Q9BXJ1 281 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC26A6Q9BXS9 759 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC13A1Q9BZW2 595 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 UCK2Q9BZX2 261 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 REXO4Q9GZR2 422 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SHARPINQ9H0F6 387 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ING2Q9H160 280 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 BLZF1Q9H2G9 400 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 OPA3Q9H6K4 179 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TDRD3Q9H7E2 651 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZFP14Q9HCL3 533 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TNFRSF12AQ9NP84 129 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABCB10Q9NRK6 738 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DUSP22Q9NRW4 184 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 IMP3Q9NV31 184 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DPP3Q9NY33 737 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 NDUFAF4Q9P032 175 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPP4R1LQ9P1A2 415 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 COPZ2Q9P299 210 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPNE7Q9UBL6 633 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DNAJB9Q9UBS3 223 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SUSD2Q9UGT4 822 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 UBQLN2Q9UHD9 624 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRPS1Q9UHF7 1281 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 DCDC2Q9UHG0 476 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SH3BGRL2Q9UJC5 107 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMPRSS11EQ9UL52 423 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 GTF2A1LQ9UNN4 478 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 AKT3Q9Y243 479 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRAPPC4Q9Y296 219 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAN2B2Q9Y2E5 1009 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PTPN22Q9Y2R2 807 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SAMHD1Q9Y3Z3 626 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDHGB1Q9Y5G3 927 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCDHAC2Q9Y5I4 1007 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAGED1Q9Y5V3 778 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPEF2Q9C093 1822 aa4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNFX1Q9P2E3 1918 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 MED1Q15648 1581 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLTCQ00610 1675 aaKnown RBP4.73□□□□□ -1.65
HMGB1P19-201ENST00000517578 IGSF1Q8N6C5 1336 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 IRS2Q9Y4H2 1338 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM237BA0A1B0GVD1 139 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRIM49BA6NDI0 452 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 C2orf71A6NGG8 1288 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR6C70A6NIJ9 312 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 AGAP5A6NIR3 686 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ERVV-1B6SEH8 477 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 HSBP1L1C9JCN9 74 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 NDUFS8O00217 210 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SULT1C2O00338 296 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 OGTO15294 1046 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TBC1D4O60343 1298 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 BRINP1O60477 761 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 H2AFYO75367 372 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PMPCBO75439 489 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TADA2AO75478 443 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RBBP9O75884 186 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNK2O95069 426 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 GABARAPO95166 117 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCNH1O95259 989 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 PTBP3O95758 552 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MPOP05164 745 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LCKP06239 509 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 HBQ1P09105 142 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF806P0C7X5 589 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ARP10275 920 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CYP2A6P11509 494 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms