RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 C1orf109Q9NX04 203 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 PKD2L2Q9NZM6 624 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 KLQ9UEF7 1012 aa14.56□□□□□ -0.08
NUP54-217ENST00000514987 LOC730098B7Z3J9 87 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 WASH3PC4AMC7 463 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 CXCL14O95715 111 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 ANXA6P08133 673 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 CYP2A6P11509 494 aaPredicted RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 MTHFD1P11586 935 aaKnown RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 AOAHP28039 575 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 OXTRP30559 389 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 SPINT3P49223 89 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 RPIAP49247 311 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 MERTKQ12866 999 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 LSAMPQ13449 338 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 ARHGEF7Q14155 803 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 GBX1Q14549 363 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 MAPKAPK3Q16644 382 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 NADK2Q4G0N4 442 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 BRAT1Q6PJG6 821 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 B3GNT6Q6ZMB0 384 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 RBM44Q6ZP01 1051 aaKnown RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 TRIML2Q8N7C3 387 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 OR52E4Q8NGH9 312 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 CCDC97Q96F63 343 aaPredicted RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 RPL10LQ96L21 214 aaKnown RBP14.55□□□□□ -0.08
NUP54-217ENST00000514987 BRD9Q9H8M2 597 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 GORASP2Q9H8Y8 452 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 SMOXQ9NWM0 555 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 ARL15Q9NXU5 204 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 SLAMF8Q9P0V8 285 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 ZNF639Q9UID6 485 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 PCDHGB4Q9UN71 923 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 SNX6Q9UNH7 406 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 PCDHGB5Q9Y5G0 923 aa14.55□□□□□ -0.08
NUP54-217ENST00000514987 ANKRD12Q6UB98 2062 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 CENPFP49454 3210 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 SERTM1A2A2V5 107 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 CFAP99D6REC4 459 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 QSOX1O00391 747 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 SEC22BO75396 215 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 DEAF1O75398 565 aaPredicted RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 AP2A2O94973 939 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 TIMP1P01033 207 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 PRPS2P11908 318 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 GGT1P19440 569 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 PRPH2P23942 346 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 MAPK1P28482 360 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 HLA-FP30511 346 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 CTSOP43234 321 aaPredicted RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 RECQLP46063 649 aaPredicted RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 STK19P49842 368 aaPredicted RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 AP1S2P56377 157 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 ZNF33BQ06732 778 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 ATP13A5Q4VNC0 1218 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 FAM98BQ52LJ0 330 aaKnown RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 ARHGAP15Q53QZ3 475 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 GDPD4Q6W3E5 623 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 UBE2R2Q712K3 238 aaPredicted RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 BPIFB1Q8TDL5 484 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 TIFAQ96CG3 184 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 PPM1MQ96MI6 270 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 CORO1BQ9BR76 489 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 ADI1Q9BV57 179 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 UGT2B28Q9BY64 529 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 YTHDF1Q9BYJ9 559 aaKnown RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 GRIP2Q9C0E4 1043 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 CLMPQ9H6B4 373 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 ZDHHC6Q9H6R6 413 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 RPF2Q9H7B2 306 aaKnown RBP14.54□□□□□ -0.08
NUP54-217ENST00000514987 ACTR8Q9H981 624 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 OLAHQ9NV23 265 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 OAZ3Q9UMX2 235 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 AK5Q9Y6K8 562 aa14.54□□□□□ -0.08
NUP54-217ENST00000514987 A8MX80 341 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 NPIPB8E9PQR5 432 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 FFAR3O14843 346 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 ACOX3O15254 700 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 GPR42O15529 346 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 TPST1O60507 370 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 ERN1O75460 977 aaKnown RBP14.53□□□□□ -0.08
NUP54-217ENST00000514987 BMP10O95393 424 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 RAP2AP10114 183 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 PABPC1P11940 636 aaKnown RBP14.53□□□□□ -0.08
NUP54-217ENST00000514987 ACPPP15309 386 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 NCK1P16333 377 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 CYP2A7P20853 494 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 HRH2P25021 359 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 CCR7P32248 378 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 GDF5P43026 501 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 HNRNPFP52597 415 aaKnown RBP14.53□□□□□ -0.08
NUP54-217ENST00000514987 OR4D2P58180 307 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 DCDC1P59894 354 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 YBX1P67809 324 aaKnown RBP14.53□□□□□ -0.08
NUP54-217ENST00000514987 SLC36A3Q495N2 470 aa14.53□□□□□ -0.08
NUP54-217ENST00000514987 NAIF1Q69YI7 327 aaPredicted RBP14.53□□□□□ -0.08
NUP54-217ENST00000514987 DPY19L3Q6ZPD9 716 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms