RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CCL21O00585 134 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 SGTAO43765 313 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 POLBP06746 335 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 CTSBP07858 339 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 AKT1P31749 480 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 GJC1P36383 396 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 CA7P43166 264 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 SSR1P43307 286 aaKnown RBP10.55□□□□□ -0.72
DDX41-216ENST00000513562 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 ZIC1Q15915 447 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.55□□□□□ -0.72
DDX41-216ENST00000513562 TLDC1Q6P9B6 456 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 XKRXQ6PP77 449 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 SPESP1Q6UW49 350 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 KIRREL2Q6UWL6 708 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 ISLR2Q6UXK2 745 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 GFRALQ6UXV0 394 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 AMIGO1Q86WK6 493 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 MAP7D3Q8IWC1 876 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 ADGRF3Q8IZF5 1079 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 ZNF655Q8N720 491 aaPredicted RBP10.55□□□□□ -0.72
DDX41-216ENST00000513562 CATSPER1Q8NEC5 780 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 OR52E1Q8NGJ3 308 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 HM13Q8TCT9 377 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 NAT14Q8WUY8 206 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.55□□□□□ -0.72
DDX41-216ENST00000513562 FKBP10Q96AY3 582 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 C14orf79Q96F83 325 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 LMF1Q96S06 567 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 WDR54Q9H977 334 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 TXLNGQ9NUQ3 528 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 AIPL1Q9NZN9 384 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 CDC23Q9UJX2 597 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 HS3ST3B1Q9Y662 390 aa10.55□□□□□ -0.72
DDX41-216ENST00000513562 DIDO1Q9BTC0 2240 aaKnown RBP10.54□□□□□ -0.72
DDX41-216ENST00000513562 LOC285095A0A1B0GVY8 99 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 C19orf84I3L1E1 186 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 PMPCBO75439 489 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 ITGAXP20702 1163 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 AGAP20933 346 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 PBX1P40424 430 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 GCGRP47871 477 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 KLHL30Q0D2K2 578 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 Q0VFX4 171 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 AP1B1Q10567 949 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 TUBB8Q3ZCM7 444 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 SARM1Q6SZW1 724 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 TMEM207Q6UWW9 146 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 LINC00696Q6ZRV3 163 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 TRIM73Q86UV7 250 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 CPNE8Q86YQ8 564 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 CFAP206Q8IYR0 622 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDX41-216ENST00000513562 OR1N1Q8NGS0 311 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 RBM41Q96IZ5 413 aaKnown RBP10.54□□□□□ -0.72
DDX41-216ENST00000513562 MAGEB10Q96LZ2 347 aaPredicted RBP10.54□□□□□ -0.72
DDX41-216ENST00000513562 FERD3LQ96RJ6 166 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 SPSB2Q99619 263 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 THAP2Q9H0W7 228 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 OR52A5Q9H2C5 316 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 MRM3Q9HC36 420 aaKnown RBP10.54□□□□□ -0.72
DDX41-216ENST00000513562 GLOD4Q9HC38 313 aa10.54□□□□□ -0.72
DDX41-216ENST00000513562 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 A0A0A6YYK5 440 aaPredicted RBP10.53□□□□□ -0.72
DDX41-216ENST00000513562 MYO1FO00160 1098 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 KLHL18O94889 574 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 UNC5CO95185 931 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 PRAMEF1O95521 474 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 ONECUT2O95948 504 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 ALBP02768 609 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 CYP1A2P05177 515 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 UGT2B7P16662 529 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
DDX41-216ENST00000513562 CDK11BP21127 795 aaKnown RBP10.53□□□□□ -0.72
DDX41-216ENST00000513562 PRLHRP49683 370 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 TAS2R40P59535 323 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 ADORA2A-AS1P86434 159 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 TMPRSS15P98073 1019 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 MYL5Q02045 173 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 NKG7Q16617 165 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 SIRPB2Q5JXA9 342 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 KDELC1Q6UW63 502 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 OVCH1Q7RTY7 1134 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 GLT6D1Q7Z4J2 308 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 HOOK3Q86VS8 718 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 OR11G2Q8NGC1 345 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 ZNF398Q8TD17 642 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 THOC3Q96J01 351 aaKnown RBP10.53□□□□□ -0.72
DDX41-216ENST00000513562 OLFM3Q96PB7 478 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 RNF157Q96PX1 679 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 NDC1Q9BTX1 674 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 SLC26A1Q9H2B4 701 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 XKR8Q9H6D3 395 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 MVB12BQ9H7P6 319 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 UBP1Q9NZI7 540 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 HACD3Q9P035 362 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 PKP3Q9Y446 797 aa10.53□□□□□ -0.72
DDX41-216ENST00000513562 HEY1Q9Y5J3 304 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms