RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 EIF2B5Q13144 721 aaKnown RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CPSF6Q16630 551 aaKnown RBP eCLIP11.07□□□□□ -0.643e-9■□□□□ 9
TCOF1-211ENST00000513346 SLC10A6Q3KNW5 377 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 BRMS1LQ5PSV4 323 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LDB1Q86U70 411 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 HJURPQ8NCD3 748 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 TMEM209Q96SK2 561 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LHPPQ9H008 270 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 C11orf49Q9H6J7 331 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 TRPC4Q9UBN4 977 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PRSS51A0A1B0GVH4 220 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 NPEPPSL1A6NEC2 478 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 SLC30A4O14863 429 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 PTTG1O95997 202 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 GABRR2P28476 465 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 HSF2Q03933 536 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 WSCD2Q2TBF2 565 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ANKRD26P1Q6NSI1 321 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 DOK6Q6PKX4 331 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 HACD2Q6Y1H2 254 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 NDRG1Q92597 394 aaKnown RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 MRPL48Q96GC5 212 aaKnown RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FAM124BQ9H5Z6 455 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ARMC1Q9NVT9 282 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FBXO10Q9UK96 956 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 GOLGA4Q13439 2230 aaKnown RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 AQP9O43315 295 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 XPNPEP2O43895 674 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 OR10H3O60404 316 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 SLITRK5O94991 958 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 OR4F21O95013 312 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 CRYZL1O95825 349 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 GLUD1P00367 558 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 AHSGP02765 367 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FGF1P05230 155 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 OR4Q2P0C623 313 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 COL6A1P12109 1028 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 GABARAPL2P60520 117 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 PIGFQ07326 219 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TAF10Q12962 218 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 C1orf220Q5T0J3 134 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 SERPINA13PQ6UXR4 307 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 METTL25Q8N6Q8 603 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TMEM74Q96NL1 305 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FZD10Q9ULW2 581 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ANGPT4Q9Y264 503 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 LYVE1Q9Y5Y7 322 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ADAMDEC1O15204 470 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 NR4A2P43354 598 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 STARP49675 285 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 IRF8Q02556 426 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FBXO48Q5FWF7 155 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 WDR45BQ5MNZ6 344 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 NCBP2-AS2Q69YL0 99 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 SULT1C3Q6IMI6 304 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TRAPPC5Q8IUR0 188 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 DCBLD1Q8N8Z6 715 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF784Q8NCA9 323 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 GLB1L3Q8NCI6 653 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 PPP1R16AQ96I34 528 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 BCL7BQ9BQE9 202 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 CCDC3Q9BQI4 270 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 MIR1-1HGQ9H1L0 117 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FZD8Q9H461 694 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ASB8Q9H765 288 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 FBRSL1Q9HCM7 1045 aaKnown RBP11.06□□□□□ -0.64
TCOF1-211ENST00000513346 TAS2R9Q9NYW1 312 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 ZIM2Q9NZV7 527 aa11.06□□□□□ -0.64
TCOF1-211ENST00000513346 BHMG1C9JSJ3 638 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TP73O15350 636 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PIRTP0C851 137 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SPATA31D3P0C874 917 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PRKACBP22694 351 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 CCNCP24863 283 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 CD40LGP29965 261 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 DNAJB13P59910 316 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TGM3Q08188 693 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 HKDC1Q2TB90 917 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 FAAH2Q6GMR7 532 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SPATA31D4Q6ZUB0 917 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PHC2Q8IXK0 858 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PQLC3Q8N755 202 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 MAPK15Q8TD08 544 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 C1QTNF7Q9BXJ2 289 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 DSN1Q9H410 356 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms