RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 DUOXA1Q1HG43 343 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 METTL2BQ6P1Q9 378 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 FAM83HQ6ZRV2 1179 aaPredicted RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 RGS9BPQ6ZS82 235 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 RASGRP3Q8IV61 690 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 DCUN1D3Q8IWE4 304 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 FBXO39Q8N4B4 442 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 RAB42Q8N4Z0 105 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 LILRA3Q8N6C8 439 aaPredicted RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 AVL9Q8NBF6 648 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 PPP1R14CQ8TAE6 165 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 GPBAR1Q8TDU6 330 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 LRRC8CQ8TDW0 803 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 CKAP2Q8WWK9 683 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ATL1Q8WXF7 558 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 EXT2Q93063 718 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 LOXL4Q96JB6 756 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 EGFL8Q99944 293 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 COL25A1Q9BXS0 654 aaPredicted RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 CAPS2Q9BXY5 557 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TMEM168Q9H0V1 697 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 C12orf65Q9H3J6 166 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 MLXIPLQ9NP71 852 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 OXSMQ9NWU1 459 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 DNAJC28Q9NX36 388 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 CD274Q9NZQ7 290 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 SIRPGQ9P1W8 387 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 SPASTQ9UBP0 616 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 PCOLCE2Q9UKZ9 415 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 RAB23Q9ULC3 237 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 ASF1AQ9Y294 204 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TNPO3Q9Y5L0 923 aaKnown RBP10.14□□□□□ -0.79
RFC1-211ENST00000509084 SLCO1B1Q9Y6L6 691 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 TRIOO75962 3097 aa10.14□□□□□ -0.79
RFC1-211ENST00000509084 OR5K4A6NMS3 321 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 A8MT66 165 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 UBXN8O00124 270 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 KLF11O14901 512 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 YKT6O15498 198 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 FFAR2O15552 330 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 DFNA5O60443 496 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 DLX3O60479 287 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 SERPINE1P05121 402 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 SBK3P0C264 359 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 F3P13726 295 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 MTHFD2P13995 350 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 PDHA2P29803 388 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ALDH3A1P30838 453 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 HSD17B2P37059 387 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ARRB1P49407 418 aaPredicted RBP10.13□□□□□ -0.79
RFC1-211ENST00000509084 CSNK1EP49674 416 aaKnown RBP10.13□□□□□ -0.79
RFC1-211ENST00000509084 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ABRQ12979 859 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 SETDB1Q15047 1291 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 SULT1C3Q6IMI6 304 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 IL27RAQ6UWB1 636 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ABRAXAS1Q6UWZ7 409 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 XKR5Q6UX68 686 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 PRR23BQ6ZRT6 265 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 GKN2Q86XP6 184 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 SPATS2Q86XZ4 545 aaKnown RBP10.13□□□□□ -0.79
RFC1-211ENST00000509084 C10orf107Q8IVU9 208 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 TBC1D21Q8IYX1 336 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 KIRREL3Q8IZU9 778 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 PIGKQ92643 395 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 TFGQ92734 400 aaPredicted RBP10.13□□□□□ -0.79
RFC1-211ENST00000509084 RAD51AP1Q96B01 352 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 RMDN2Q96LZ7 410 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 CCDC138Q96M89 665 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 C12orf66Q96MD2 445 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 RAB11FIP5Q9BXF6 653 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ZDHHC5Q9C0B5 715 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 WWP1Q9H0M0 922 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 TRIT1Q9H3H1 467 aaKnown RBP10.13□□□□□ -0.79
RFC1-211ENST00000509084 MVB12BQ9H7P6 319 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 C11orf16Q9NQ32 467 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ARL15Q9NXU5 204 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 POLG2Q9UHN1 485 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ADAM21Q9UKJ8 722 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ADAMTS6Q9UKP5 1117 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 IKZF3Q9UKT9 509 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 PDE10AQ9Y233 779 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 PCDHGA5Q9Y5G8 931 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 CACNA1IQ9P0X4 2223 aa10.13□□□□□ -0.79
RFC1-211ENST00000509084 ATXN2Q99700 1313 aaKnown RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 KIR2DS5A0A0G2JLQ3 304 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 A0A0G2JNG1 304 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 A0A1B0GVT2 93 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 WDR91A4D1P6 747 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 SRRM3A6NNA2 597 aaPredicted RBP10.12□□□□□ -0.79
RFC1-211ENST00000509084 ZNF839A8K0R7 811 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 ARHGEF33A8MVX0 844 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 TMEM114B3SHH9 223 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 KIR2DS3K7RE56 304 aa10.12□□□□□ -0.79
RFC1-211ENST00000509084 MYO1CO00159 1063 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms