RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RASGRP3Q8IV61 690 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 RHEBL1Q8TAI7 183 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 MRPL57Q9BQC6 102 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 SLC12A9Q9BXP2 914 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 IMP3Q9NV31 184 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 CPSF2Q9P2I0 782 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 XPR1Q9UBH6 696 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 RALGAPA1Q6GYQ0 2036 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 NEMP2A6NFY4 417 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 LMNAP02545 664 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 ANXA6P08133 673 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 ZNF806P0C7X5 589 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 RPE65Q16518 533 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 ADAMTSL2Q86TH1 951 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 SFTPA2Q8IWL1 248 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 NAGSQ8N159 534 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 SELENOSQ9BQE4 189 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 MRPL46Q9H2W6 279 aaKnown RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 ZNF624Q9P2J8 865 aaPredicted RBP19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 RNF112Q9ULX5 631 aa19.9■□□□□ 0.78
CDC42SE2-206ENST00000503291 TK2O00142 265 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 SLC16A5O15375 505 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 PLIN3O60664 434 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 C1orf105O95561 183 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 PHKG1Q16816 387 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 CCDC153Q494R4 210 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 DUS1LQ6P1R4 473 aaKnown RBP19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 UNC5DQ6UXZ4 953 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 GATAD2AQ86YP4 633 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 SAP25Q8TEE9 199 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 ZDHHC1Q8WTX9 485 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 PATE1Q8WXA2 126 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 FAM111AQ96PZ2 611 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 ATOH8Q96SQ7 321 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 PARVBQ9HBI1 364 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 UTP6Q9NYH9 597 aaKnown RBP19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 PDE10AQ9Y233 779 aa19.89■□□□□ 0.77
CDC42SE2-206ENST00000503291 LNP1A1A4G5 178 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 CCDC189A1A4V9 331 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ARHGEF33A8MVX0 844 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 YKT6O15498 198 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 KERAO60938 352 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 CATP04040 527 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 PROCP04070 461 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SBK3P0C264 359 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ATXN3P54252 364 aaPredicted RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SP140Q13342 867 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 PPP1R3AQ16821 1122 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 GPSM1Q86YR5 675 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 MINDY1Q8N5J2 469 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 OR5AR1Q8NGP9 310 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 FERD3LQ96RJ6 166 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ANKRD12Q6UB98 2062 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 OR5K4A6NMS3 321 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 TARM1B6A8C7 271 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 TM9SF1O15321 606 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 FFAR2O15552 330 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ZWINTO95229 277 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 GIMD1P0DJR0 217 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 MTHFD1P11586 935 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 CYP2A7P20853 494 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 MAP4P27816 1152 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SLC19A1P41440 591 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 RPIAP49247 311 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 CCT8P50990 548 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SLC18A1P54219 525 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 PPP2R2AP63151 447 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SPEM2Q0P670 501 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 SF3A2Q15428 464 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 TGFBIQ15582 683 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 FRA10AC1Q70Z53 315 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 KANSL1Q7Z3B3 1105 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ANKRD42Q8N9B4 389 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 CCDC63Q8NA47 563 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 ARMC2Q8NEN0 867 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 OR5K2Q8NHB8 316 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 MCOLN3Q8TDD5 553 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 OARD1Q9Y530 152 aa19.88■□□□□ 0.77
CDC42SE2-206ENST00000503291 B4DGG1 531 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 NR1D1P20393 614 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 BDKRB1P46663 353 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 PRKG2Q13237 762 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 CCSMST1Q4G0I0 132 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 TBC1D21Q8IYX1 336 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 SFRP1Q8N474 314 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 DENND1AQ8TEH3 1009 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 EXT2Q93063 718 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 TRIM54Q9BYV2 358 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 TRIT1Q9H3H1 467 aaKnown RBP19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 NCDNQ9UBB6 729 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 HEBP2Q9Y5Z4 205 aa19.87■□□□□ 0.77
CDC42SE2-206ENST00000503291 KIR2DS5A0A0G2JLQ3 304 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 PRAMEF33A0A0G2JMD5 474 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 A0A0G2JNG1 304 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 KRT87PA6NCN2 255 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 KIR2DS3K7RE56 304 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 RPN2P04844 631 aa19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 ENO2P09104 434 aaPredicted RBP19.86■□□□□ 0.77
CDC42SE2-206ENST00000503291 HIST1H2AGP0C0S8 130 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms