RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 YIF1BQ5BJH7 314 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 KANK2Q63ZY3 851 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 OR2T11Q8NH01 316 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ACAT2Q9BWD1 397 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 IKZF5Q9H5V7 419 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 FKBP14Q9NWM8 211 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 TBC1D24Q9ULP9 559 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 CCDC182A6NF36 153 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 I6L893 689 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 OR4F21O95013 312 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC10A3P09131 477 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ALDH6A1Q02252 535 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 CREMQ03060 361 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF267Q14586 743 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PTCHD3Q3KNS1 767 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ANKS6Q68DC2 871 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 CEP68Q76N32 757 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 CDH24Q86UP0 819 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PJA1Q8NG27 643 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PROKR1Q8TCW9 393 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF583Q96ND8 569 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC52A3Q9NQ40 469 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 TAS2R16Q9NYV7 291 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 OR12D3Q9UGF7 316 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ZNF451Q9Y4E5 1061 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 NUP214P35658 2090 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ELOVL7A1L3X0 281 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 I3L521 148 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PIRTP0C851 137 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 NAT2P11245 290 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 BMP1P13497 986 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 RYKP34925 604 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 MLLT3P42568 568 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 LCP2Q13094 533 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 DMC1Q14565 340 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 SGO1Q5FBB7 561 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ESX1Q8N693 406 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 ABCG8Q9H221 673 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 PRM3Q9NNZ6 103 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.36
GAPVD1-220ENST00000497580 NRCAMQ92823 1304 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 BTAF1O14981 1849 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 FAM234BA2RU67 622 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 SMIM30A4D0T7 59 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 EPN2O95208 641 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 PPP3CCP48454 512 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GMPSP49915 693 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 CRISP3P54108 245 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 DUSP7Q16829 419 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 OTUD1Q5VV17 481 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 IL27RAQ6UWB1 636 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GLRX5Q86SX6 157 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 CNTN4Q8IWV2 1026 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 OR8H1Q8NGG4 311 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 ANGPTL6Q8NI99 470 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 CHAC2Q8WUX2 184 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 L3HYPDHQ96EM0 354 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 M0R129 80 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 ANXA9O76027 345 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 BEST1O76090 585 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 ARSDP51689 593 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MAPK12P53778 367 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MAP3K7CLP57077 242 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GALNT1Q10472 559 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GBX1Q14549 363 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 PON2Q15165 354 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 NLRP8Q86W28 1048 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 ZDHHC21Q8IVQ6 265 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 SLC7A6Q92536 515 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 DNASE1L2Q92874 299 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GFM1Q96RP9 751 aaKnown RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 TKTL2Q9H0I9 626 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 KRT84Q9NSB2 600 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 EFCAB10A6NFE3 127 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 CAPN5O15484 640 aaPredicted RBP12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 KIAA0513O60268 411 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 FKBP9O95302 570 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 ICAM3P32942 547 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 TKTL1P51854 596 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MXD1Q05195 221 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 PRKCDQ05655 676 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 GPR50Q13585 617 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 MED22Q15528 200 aa12.82□□□□□ -0.36
GAPVD1-220ENST00000497580 TSNQ15631 228 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms