RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PTPRCAPQ14761 206 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 SPA17Q15506 151 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF658BQ4V348 819 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 DAAM2Q86T65 1068 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 FDCSPQ8NFU4 85 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 DENND1AQ8TEH3 1009 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 TM9SF4Q92544 642 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 TFGQ92734 400 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 N4BP2L2Q92802 583 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 SPATA13Q96N96 652 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 SRPK3Q9UPE1 567 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 PCDHA3Q9Y5H8 950 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 CENPEQ02224 2701 aa16.32■□□□□ 0.2
TRAPPC3-207ENST00000497251 F5H423 210 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 BTN3A1O00481 513 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 PEX12O00623 359 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 TJP3O95049 919 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 RBP3P10745 1247 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ST6GAL1P15907 406 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ACRV1P26436 265 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 SHMT2P34897 504 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 CTNNA1P35221 906 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 UQCRFS1P47985 274 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ARCN1P48444 511 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 SOX8P57073 446 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 LLGL1Q15334 1064 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 SLC6A19Q695T7 634 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 SPESP1Q6UW49 350 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 LURAP1LQ8IV03 231 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZBTB2Q8N680 514 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 CLEC1AQ8NC01 280 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 OR52E1Q8NGJ3 308 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ACTL9Q8TC94 416 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 TBL1YQ9BQ87 522 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 GORASP1Q9BQQ3 440 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 AP1M1Q9BXS5 423 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 OSBPL8Q9BZF1 889 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 OR6C2Q9NZP2 312 aa16.31■□□□□ 0.2
TRAPPC3-207ENST00000497251 ANKRD12Q6UB98 2062 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 TNRC6AQ8NDV7 1962 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 BTN3A3O00478 584 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF185O15231 689 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PSMD3O43242 534 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF749O43361 778 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 LDB2O43679 373 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PSMA3P25788 255 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PSMB4P28070 264 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 NSG1P42857 185 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 EIF3EP60228 445 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 CACNG1Q06432 222 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ITIH4Q14624 930 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ZNF385CQ66K41 422 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 DENND5AQ6IQ26 1287 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 LCN10Q6JVE6 187 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 RHBDD2Q6NTF9 364 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 TLDC1Q6P9B6 456 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 DARS2Q6PI48 645 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ADGRF3Q8IZF5 1079 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 IQCKQ8N0W5 287 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 LILRA3Q8N6C8 439 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 RBMXL3Q8N7X1 1067 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 OR13C4Q8NGS5 318 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 STYXQ8WUJ0 223 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PPM1MQ96MI6 270 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 NUDT9Q9BW91 350 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 NLE1Q9NVX2 485 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 ACTR10Q9NZ32 417 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 FAM8A1Q9UBU6 413 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 GPN3Q9UHW5 284 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 PCDHA13Q9Y5I0 950 aa16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 SPENQ96T58 3664 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3-207ENST00000497251 KCNN4O15554 427 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 PJA2O43164 708 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 KLF7O75840 302 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 OR2B3O76000 313 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 MC4RP32245 332 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 RWDD2BP57060 319 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 DCDP81605 110 aaKnown RBP16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 MYBPC3Q14896 1274 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 PARP6Q2NL67 630 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 PRAMEF17Q5VTA0 474 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 LYPLAL1Q5VWZ2 237 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 FBXO38Q6PIJ6 1188 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 CDHR3Q6ZTQ4 885 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 SERPINA9Q86WD7 417 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 TBC1D21Q8IYX1 336 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 Q8NA96 180 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 COG1Q8WTW3 980 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 PTERQ96BW5 349 aa16.29■□□□□ 0.2
TRAPPC3-207ENST00000497251 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms