RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CEACAM20Q6UY09 585 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 PRSS42Q7Z5A4 293 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 KCNMB4Q86W47 210 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 CILP2Q8IUL8 1156 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 ZBED8Q8IZ13 594 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 CARFQ8N187 725 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 AGGF1Q8N302 714 aaeCLIP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 OR4E2Q8NGC2 313 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 PYROXD1Q8WU10 500 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 HNRNPLLQ8WVV9 542 aaKnown RBP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 JPH3Q8WXH2 748 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 SEC14L1Q92503 715 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 CFAP36Q96G28 342 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 PWWP2AQ96N64 755 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 DDA1Q9BW61 102 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 TSPYL1Q9H0U9 437 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 P2RY12Q9H244 342 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 ZNF768Q9H5H4 540 aaKnown RBP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 L2HGDHQ9H9P8 463 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 MTRF1LQ9UGC7 380 aaKnown RBP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 CHMP2BQ9UQN3 213 aa15.94■□□□□ 0.14
SF3A1-209ENST00000496189 TDRKHQ9Y2W6 561 aaKnown RBP15.94■□□□□ 0.14
SF3A1-209ENST00000496189 EPG5Q9HCE0 2579 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 GSAPA4D1B5 854 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 TLCD2A6NGC4 264 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 POLR1CO15160 346 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 KLK10O43240 276 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 BANF1O75531 89 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 FGF3P11487 239 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 CHRM3P20309 590 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 AOAHP28039 575 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 CCR7P32248 378 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 SHMT2P34897 504 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 ETV5P41161 510 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 LEPRP48357 1165 aaKnown RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 ADARP55265 1226 aaKnown RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 FOXM1Q08050 763 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PRKG2Q13237 762 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 HP1BP3Q5SSJ5 553 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PLEKHS1Q5SXH7 462 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 TMTC4Q5T4D3 741 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 NAPRTQ6XQN6 538 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 AMIGO1Q86WK6 493 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 KMT5CQ86Y97 462 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 ANKMY2Q8IV38 441 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 SLC22A15Q8IZD6 547 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 KRT222Q8N1A0 295 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 RAB42Q8N4Z0 105 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PHC3Q8NDX5 983 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 FBXO36Q8NEA4 188 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 OR5K2Q8NHB8 316 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 FBXO25Q8TCJ0 367 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 LPGAT1Q92604 370 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 TRIM56Q9BRZ2 755 aaKnown RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 TFB2MQ9H5Q4 396 aaKnown RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 SAYSD1Q9NPB0 183 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PPANQ9NQ55 473 aaKnown RBP15.93■□□□□ 0.14
SF3A1-209ENST00000496189 CRYL1Q9Y2S2 319 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PCDHGA3Q9Y5H0 932 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 COMMD10Q9Y6G5 202 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 PIKFYVEQ9Y2I7 2098 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 ACACAQ13085 2346 aa15.93■□□□□ 0.14
SF3A1-209ENST00000496189 ESYT3A0FGR9 886 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 IQCF5A8MTL0 148 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 C2orf74A8MZ97 194 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 STMND1H3BQB6 276 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 LIPCP11150 499 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 PKMP14618 531 aaKnown RBP15.92■□□□□ 0.14
SF3A1-209ENST00000496189 POLR2CP19387 275 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-209ENST00000496189 CDH3P22223 829 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 ATP1A2P50993 1020 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 MC2RQ01718 297 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 TTLL9Q3SXZ7 439 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 HSP90AA5PQ58FG0 334 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 XKR5Q6UX68 686 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 UNC5DQ6UXZ4 953 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 CCDC25Q86WR0 208 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 IGDCC3Q8IVU1 814 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 IFT20Q8IY31 132 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 SIDT2Q8NBJ9 832 aaKnown RBP15.92■□□□□ 0.14
SF3A1-209ENST00000496189 OR52E1Q8NGJ3 308 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 OR5AR1Q8NGP9 310 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 CFAP61Q8NHU2 1237 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 FBXO8Q9NRD0 319 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 OCIAD1Q9NX40 245 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 FREM2Q5SZK8 3169 aa15.92■□□□□ 0.14
SF3A1-209ENST00000496189 KIF26BQ2KJY2 2108 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 USP24Q9UPU5 2620 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 WDFY3Q8IZQ1 3526 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 GPC4O75487 556 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 TMPRSS3P57727 454 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 TUBB4BP68371 445 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 CUL1Q13616 776 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 FRG1Q14331 258 aaKnown RBP15.91■□□□□ 0.14
SF3A1-209ENST00000496189 STEAP4Q687X5 459 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 ZDHHC24Q6UX98 284 aa15.91■□□□□ 0.14
SF3A1-209ENST00000496189 UNC5AQ6ZN44 842 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms