RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SLC45A3Q96JT2 553 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 MAP3K3Q99759 626 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 ULBP3Q9BZM4 244 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 IL22Q9GZX6 179 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 KIR3DX1Q9H7L2 352 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 COG4Q9H9E3 785 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 HRASLS2Q9NWW9 162 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 SLC2A6Q9UGQ3 507 aa12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 DMGDHQ9UI17 866 aaKnown RBP12.36□□□□□ -0.43
SEC61A1-206ENST00000491668 C17orf113A0A1B0GUU1 675 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 HEATR9A2RTY3 570 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 KLHL33A6NCF5 533 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 OR6C74A6NCV1 312 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 SDR42E2A6NKP2 422 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 B8ZZF3 427 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 AVILO75366 819 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 RALBP11234 206 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ADRA1DP25100 572 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 MGAT1P26572 445 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 FOXN2P32314 431 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ARCN1P48444 511 aaKnown RBP12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 CACNG1Q06432 222 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ABHD18Q0P651 414 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 MAP7Q14244 749 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 PLCL1Q15111 1095 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 HIF1AQ16665 826 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 BBS9Q3SYG4 887 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ATP1A1-AS1Q5TC04 95 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 GALNT6Q8NCL4 622 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 STYXQ8WUJ0 223 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 ZFPM2Q8WW38 1151 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 CCM2Q9BSQ5 444 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 AKIRIN1Q9H9L7 192 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 GPN2Q9H9Y4 310 aaPredicted RBP12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 STARD5Q9NSY2 213 aa12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 MRPS18BQ9Y676 258 aaKnown RBP12.35□□□□□ -0.43
SEC61A1-206ENST00000491668 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 SPAG6O75602 509 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 EBLN1P0CF75 366 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 TPBGLP0DKB5 382 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 PREPP48147 710 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 KPNA2P52292 529 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 CRADDP78560 199 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 ACVR1Q04771 509 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 CUL1Q13616 776 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 PWWP2BQ6NUJ5 590 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 CENPUQ71F23 418 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 ZNF534Q76KX8 674 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 NLRP9Q7RTR0 991 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 PHC3Q8NDX5 983 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 HEXDCQ8WVB3 486 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 SYBUQ9NX95 663 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 GRHL1Q9NZI5 618 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 RPS6KL1Q9Y6S9 549 aa12.34□□□□□ -0.43
SEC61A1-206ENST00000491668 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 TLCD2A6NGC4 264 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 ZNF891A8MT65 544 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 BTN3A3O00478 584 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 OR1I1O60431 355 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 ZIC2O95409 532 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 SPTBP11277 2137 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 NFKB2Q00653 900 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 PDIA2Q13087 525 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 TUBB3Q13509 450 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 TRADDQ15628 312 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 KLHL35Q6PF15 583 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 NAPRTQ6XQN6 538 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 D2HGDHQ8N465 521 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 ESX1Q8N693 406 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 OR4E2Q8NGC2 313 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 FBXO25Q8TCJ0 367 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 STARD8Q92502 1023 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 HDAC10Q969S8 669 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 RANBP9Q96S59 729 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 CD180Q99467 661 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 FAM129AQ9BZQ8 928 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 TRIT1Q9H3H1 467 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 GEMIN8Q9NWZ8 242 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 POMT2Q9UKY4 750 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 TCAF1Q9Y4C2 921 aa12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 V9GYY5 206 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-206ENST00000491668 PRRC2CQ9Y520 2896 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms