RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SOX5P35711 763 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 ARL4AP40617 200 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 ZNF165P49910 485 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 ZIC1Q15915 447 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 NKG7Q16617 165 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 SIRT6Q8N6T7 355 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 BRIX1Q8TDN6 353 aaKnown RBP13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 RMDN2Q96LZ7 410 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 GANQ9H2C0 597 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 ZNF711Q9Y462 761 aa13.16□□□□□ -0.3
EXOSC3-207ENST00000490516 GOLGA6L4A6NEF3 574 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 GPR39O43194 453 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 WDPCPO95876 746 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 MT-CYBP00156 380 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 ALAS2P22557 587 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 CD86P42081 329 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 MEOX1P50221 254 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 KRT33BQ14525 404 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 GSE1Q14687 1217 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 CLEC9AQ6UXN8 241 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 ELOA2Q8IYF1 753 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 MCOLN2Q8IZK6 566 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 C19orf47Q8N9M1 422 aaKnown RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 CCDC110Q8TBZ0 833 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 BRSK1Q8TDC3 778 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 AGAP11Q8TF27 550 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 NAT14Q8WUY8 206 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 NUDT8Q8WV74 236 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 MAML1Q92585 1016 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 ADGRE3Q9BY15 652 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 GPR63Q9BZJ6 419 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 TSPAN10Q9H1Z9 355 aaPredicted RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 BPIFA1Q9NP55 256 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 IRAK4Q9NWZ3 460 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 COLEC10Q9Y6Z7 277 aa13.15□□□□□ -0.3
EXOSC3-207ENST00000490516 NKX2-6A6NCS4 301 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 ADAM10O14672 748 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 MATN3O15232 486 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 RNF8O76064 485 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 HPP00738 406 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 SLC35G4P0C7Q5 338 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 IL1R2P27930 398 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 NDUFS1P28331 727 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 KLK7P49862 253 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 JAM2P57087 298 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 MAMLD1Q13495 774 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 DPYSL2Q16555 572 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 FNBP1LQ5T0N5 605 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 FAM182AQ5T1J6 154 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 CES4AQ5XG92 561 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 COX15Q7KZN9 410 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 KBTBD2Q8IY47 623 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 HSPH1Q92598 858 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 FKBP10Q96AY3 582 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 C8orf44Q96CB5 159 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 GPR137Q96N19 417 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 WDR54Q9H977 334 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 DNAJB12Q9NXW2 375 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 CTSFQ9UBX1 484 aa13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 DNMT3AQ9Y6K1 912 aaPredicted RBP13.14□□□□□ -0.31
EXOSC3-207ENST00000490516 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 AURKAO14965 403 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A9O60656 530 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PMPCBO75439 489 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 USP1O94782 785 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 ZWINTO95229 277 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PRAMEF1O95521 474 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 POLBP06746 335 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 PRR35P0CG20 571 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 TCF4P15884 667 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A6P19224 532 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 UGT1A1P22309 533 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 ADSLP30566 484 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 SERPINB6P35237 376 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 POLR2FP61218 127 aaKnown RBP13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 CACNG1Q06432 222 aa13.13□□□□□ -0.31
EXOSC3-207ENST00000490516 MYBPHQ13203 477 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms