RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RAP2CQ9Y3L5 183 aa20.38■□□□□ 0.85
SND1-214ENST00000489417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 SCAMP1O15126 338 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 TAPBPO15533 448 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 C1orf105O95561 183 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 SLC35G4P0C7Q5 338 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 SF3A3Q12874 501 aaKnown RBP eCLIP20.37■□□□□ 0.856e-8■■■□□ 18.2
SND1-214ENST00000489417 PRKAA1Q13131 559 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 PCBP2Q15366 365 aaKnown RBP eCLIP20.37■□□□□ 0.85
SND1-214ENST00000489417 C18orf21Q32NC0 220 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 GKAP1Q5VSY0 366 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 HID1Q8IV36 788 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 C1orf210Q8IVY1 113 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 TMEFF1Q8IYR6 380 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 MFSD2AQ8NA29 543 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 FBXO15Q8NCQ5 510 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 ZNF483Q8TF39 744 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 ESAMQ96AP7 390 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 THOC1Q96FV9 657 aaKnown RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 RMDN2Q96LZ7 410 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 TMEM79Q9BSE2 394 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 TRIM55Q9BYV6 548 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 ILKAPQ9H0C8 392 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 DUSP15Q9H1R2 295 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 EML4Q9HC35 981 aaKnown RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 NPHS2Q9NP85 383 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 PCTPQ9UKL6 214 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 PNMA8BQ9ULN7 279 aaPredicted RBP20.37■□□□□ 0.85
SND1-214ENST00000489417 PSMD13Q9UNM6 376 aa20.37■□□□□ 0.85
SND1-214ENST00000489417 SPTY2D1-AS1A0A0U1RR47 76 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 A0A1W2PR77 199 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 IFRD1O00458 451 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 IDSP22304 550 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 MPSTP25325 297 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 MAOBP27338 520 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CD38P28907 300 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CLCNKAP51800 687 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 RACK1P63244 317 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 CSTF1Q05048 431 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 GALNT1Q10472 559 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 LRP8Q14114 963 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 LONP2Q86WA8 852 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 DCP2Q8IU60 420 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 ZNF781Q8N8C0 355 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 TMEM105Q8N8V8 129 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 SPDYE1Q8NFV5 336 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 FBXL8Q96CD0 374 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 NSUN5Q96P11 429 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 PNPOQ9NVS9 261 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 KLHL14Q9P2G3 628 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 MARCOQ9UEW3 520 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 HAO1Q9UJM8 370 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 ASB1Q9Y576 335 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 DGKBQ9Y6T7 804 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 TECTAO75443 2155 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 EML5Q05BV3 1969 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 RASGRP1O95267 797 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 TNFP01375 233 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 KITP10721 976 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 HSPA7P48741 367 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 HNMTP50135 292 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CDH13P55290 713 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CLCQ05315 142 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 EIF2B5Q13144 721 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 FZD2Q14332 565 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CCSMST1Q4G0I0 132 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CAPRIN2Q6IMN6 1127 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 METTL2BQ6P1Q9 378 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 IQCHQ86VS3 1027 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 MAML2Q8IZL2 1156 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 PIWIL2Q8TC59 973 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 TFGQ92734 400 aaPredicted RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 CCDC138Q96M89 665 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 SHCBP1LQ9BZQ2 653 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 CD244Q9BZW8 370 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 MIR1-1HGQ9H1L0 117 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 TM9SF3Q9HD45 589 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 TRNAU1APQ9NX07 287 aaKnown RBP20.36■□□□□ 0.85
SND1-214ENST00000489417 ASF1AQ9Y294 204 aa20.36■□□□□ 0.85
SND1-214ENST00000489417 E2F3O00716 465 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 WNT1P04628 370 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 TSPAN8P19075 237 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 RPL10P27635 214 aaKnown RBP20.35■□□□□ 0.85
SND1-214ENST00000489417 GGT5P36269 586 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 CTBSQ01459 385 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 TTC23LQ6PF05 361 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 LPCAT2Q7L5N7 544 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 CUZD1Q86UP6 607 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 DTWD2Q8NBA8 298 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 RFWD2Q8NHY2 731 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 MAGEC3Q8TD91 643 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 TRPC4APQ8TEL6 797 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 ATL1Q8WXF7 558 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 DNASE2BQ8WZ79 361 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 SEC16BQ96JE7 1060 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 PKP4Q99569 1192 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 TMEM168Q9H0V1 697 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 ST14Q9Y5Y6 855 aa20.35■□□□□ 0.85
SND1-214ENST00000489417 KRT87PA6NCN2 255 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 383.4 ms