RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TYRP1P17643 537 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 MAGEA4P43358 317 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 LSSP48449 732 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 CSE1LP55060 971 aaKnown RBP18.14■□□□□ 0.49
PTCD3-217ENST00000488801 GFERP55789 205 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 GRB7Q14451 532 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 NEK10Q6ZWH5 1172 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 ZBTB2Q8N680 514 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 OR52E1Q8NGJ3 308 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 WDR36Q8NI36 951 aaKnown RBP18.14■□□□□ 0.49
PTCD3-217ENST00000488801 JPH3Q8WXH2 748 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-217ENST00000488801 AHCYL2Q96HN2 611 aaKnown RBP18.14■□□□□ 0.49
PTCD3-217ENST00000488801 C9orf72Q96LT7 481 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 LRRC4CQ9HCJ2 640 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 ZFATQ9P243 1243 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 SATB2Q9UPW6 733 aa18.14■□□□□ 0.49
PTCD3-217ENST00000488801 ESPNB1AK53 854 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 MLLT3P42568 568 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-217ENST00000488801 PPP1CAP62136 330 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 PLCL1Q15111 1095 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 ZC3HC1Q86WB0 502 aaKnown RBP18.13■□□□□ 0.49
PTCD3-217ENST00000488801 PLXDC1Q8IUK5 500 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 PHC3Q8NDX5 983 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 NCSTNQ92542 709 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 FERD3LQ96RJ6 166 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 GPR21Q99679 349 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 NRTNQ99748 197 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 HGH1Q9BTY7 390 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 STRADBQ9C0K7 418 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 TRIT1Q9H3H1 467 aaKnown RBP18.13■□□□□ 0.49
PTCD3-217ENST00000488801 POLR1BQ9H9Y6 1135 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 ASCL3Q9NQ33 180 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 ICKQ9UPZ9 632 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 ASF1AQ9Y294 204 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 DHRS7Q9Y394 339 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 CELSR3Q9NYQ7 3312 aa18.13■□□□□ 0.49
PTCD3-217ENST00000488801 CXorf49A8MYA2 514 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-217ENST00000488801 E5RI56 91 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 EIF3FO00303 357 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-217ENST00000488801 TOX3O15405 576 aaPredicted RBP18.12■□□□□ 0.49
PTCD3-217ENST00000488801 SPAG6O75602 509 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 CHRM3P20309 590 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 FDXRP22570 491 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 ABCG1P45844 678 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 MAPK9P45984 424 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 CUL1Q13616 776 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 ACSBG2Q5FVE4 666 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 C3orf38Q5JPI3 329 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 CCDC25Q86WR0 208 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 SPNS2Q8IVW8 549 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 DCUN1D3Q8IWE4 304 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 SIDT2Q8NBJ9 832 aaKnown RBP18.12■□□□□ 0.49
PTCD3-217ENST00000488801 FAM136AQ96C01 138 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 FMO2Q99518 471 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 NDNQ99608 321 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 FUT8Q9BYC5 575 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 CCDC68Q9H2F9 335 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 PPANQ9NQ55 473 aaKnown RBP18.12■□□□□ 0.49
PTCD3-217ENST00000488801 NSMCE4AQ9NXX6 385 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 POLG2Q9UHN1 485 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 PTPRQQ9UMZ3 2332 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
PTCD3-217ENST00000488801 KMT2BQ9UMN6 2715 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-217ENST00000488801 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 PLD2O14939 933 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 CAPN5O15484 640 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-217ENST00000488801 MPOP05164 745 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 ENO3P13929 434 aaPredicted RBP18.11■□□□□ 0.49
PTCD3-217ENST00000488801 AMD1P17707 334 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 CDKN2DP55273 166 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 GABREP78334 506 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 KYNUQ16719 465 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 PHF19Q5T6S3 580 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 KLHL35Q6PF15 583 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 CAPN12Q6ZSI9 719 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 RAB11FIP2Q7L804 512 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 OOSP2Q86WS3 158 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 PALM2Q8IXS6 379 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 ADGRF3Q8IZF5 1079 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 BMPERQ8N8U9 685 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 RCBTB1Q8NDN9 531 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 INPP5DQ92835 1189 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 SIDT1Q9NXL6 827 aaKnown RBP18.11■□□□□ 0.49
PTCD3-217ENST00000488801 MTRF1LQ9UGC7 380 aaKnown RBP18.11■□□□□ 0.49
PTCD3-217ENST00000488801 POMT2Q9UKY4 750 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 LOXL2Q9Y4K0 774 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 NFS1Q9Y697 457 aa18.11■□□□□ 0.49
PTCD3-217ENST00000488801 CDRT15L2A8MXV6 281 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 BTN3A3O00478 584 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 BRINP1O60477 761 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 VPS26AO75436 327 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
PTCD3-217ENST00000488801 C1orf105O95561 183 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 RPN2P04844 631 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 MPC1LP0DKB6 136 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CBSLP0DN79 551 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 MPSTP25325 297 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 PKLRP30613 574 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CBSP35520 551 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms