RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 USP24Q9UPU5 2620 aa12.55□□□□□ -0.4
PHF1-210ENST00000488767 A0A087WV48 116 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 TLCD2A6NGC4 264 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 C2orf74A8MZ97 194 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 POLR1CO15160 346 aaPredicted RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 TP73O15350 636 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 RAD51CO43502 376 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 GPC4O75487 556 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 CCL4P13236 92 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 PKMP14618 531 aaKnown RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 ELK3P41970 407 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 SLC1A2P43004 574 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 LEPRP48357 1165 aaKnown RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 SEPHS1P49903 392 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 UCNP55089 124 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 FOXM1Q08050 763 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 CTBP1Q13363 440 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 TMTC4Q5T4D3 741 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 UGT3A1Q6NUS8 523 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 NAPRTQ6XQN6 538 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 KIAA0408Q6ZU52 694 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 KMT5CQ86Y97 462 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 OR52E1Q8NGJ3 308 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 OR5AR1Q8NGP9 310 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 CFAP61Q8NHU2 1237 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 MAGEC3Q8TD91 643 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 CERS2Q96G23 380 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 FBXO6Q9NRD1 293 aaPredicted RBP12.54□□□□□ -0.4
PHF1-210ENST00000488767 FBXO5Q9UKT4 447 aa12.54□□□□□ -0.4
PHF1-210ENST00000488767 ACACAQ13085 2346 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 TAF4O00268 1085 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 PRAMEF10O60809 474 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 VPS26AO75436 327 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 SLCO2B1O94956 709 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 S1PR4O95977 384 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 FGF3P11487 239 aaPredicted RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 POLR2CP19387 275 aaPredicted RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 CDH3P22223 829 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 ACADLP28330 430 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 ATP5DP30049 168 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 CCNFP41002 786 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 MC2RQ01718 297 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 ABRQ12979 859 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 FRG1Q14331 258 aaKnown RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 DUPD1Q68J44 220 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 XKR5Q6UX68 686 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 DENND6AQ8IWF6 608 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 SIDT2Q8NBJ9 832 aaKnown RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 LKAAEAR1Q8TD35 194 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 KCNJ9Q92806 393 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 NAF1Q96HR8 494 aaKnown RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 BIRC8Q96P09 236 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 RAB11FIP5Q9BXF6 653 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 PDE7BQ9NP56 450 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 FBXO8Q9NRD0 319 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 SOHLH2Q9NX45 425 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 OR6C2Q9NZP2 312 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 ZFATQ9P243 1243 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 SLC39A10Q9ULF5 831 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 PIKFYVEQ9Y2I7 2098 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
PHF1-210ENST00000488767 APC2O95996 2303 aa12.53□□□□□ -0.4
PHF1-210ENST00000488767 WDFY3Q8IZQ1 3526 aa12.52□□□□□ -0.4
PHF1-210ENST00000488767 PIPSLA2A3N6 862 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 CTAGE15A4D2H0 777 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 E7ESA3 106 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
PHF1-210ENST00000488767 KLK10O43240 276 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 NIPSNAP2O75323 286 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 BANF1O75531 89 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 ZBTB11O95625 1053 aaPredicted RBP12.52□□□□□ -0.41
PHF1-210ENST00000488767 CTAGE8P0CG41 777 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 ERVK-10P10266 1014 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 LIPCP11150 499 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 ETV5P41161 510 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 HSD11B2P80365 405 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.41
PHF1-210ENST00000488767 ACY1Q03154 408 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 ILF2Q12905 390 aaKnown RBP12.52□□□□□ -0.41
PHF1-210ENST00000488767 IL11RAQ14626 422 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
PHF1-210ENST00000488767 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
PHF1-210ENST00000488767 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms