RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 HUNKP57058 714 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 RPS3AP61247 264 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DAB2P98082 770 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 SLC14A1Q13336 389 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PRSS36Q5K4E3 855 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ZNF648Q5T619 568 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DCP2Q8IU60 420 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 EID3Q8N140 333 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 SLC13A3Q8WWT9 602 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ZHX1-C8orf76Q96EF9 292 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 FAM120BQ96EK7 910 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 BOCQ9BWV1 1114 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 MROQ9BYG7 248 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DPY30Q9C005 99 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ZYG11BQ9C0D3 744 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 SMPD4Q9NXE4 827 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 TMEM9Q9P0T7 183 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ORC6Q9Y5N6 252 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ELOVL7A1L3X0 281 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 CHRNA1P02708 482 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 IRF1P10914 325 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 COL6A1P12109 1028 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DNAJB2P25686 324 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PTRH1Q86Y79 214 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 STARD8Q92502 1023 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 EBPLQ9BY08 206 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GPN2Q9H9Y4 310 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 RRN3P2A6NIE6 340 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 H0YAE9 185 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 E2F3O00716 465 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PER2O15055 1255 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 SNPHO15079 494 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 NTRK1P04629 796 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 AZGP1P25311 298 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 GKP32189 559 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 CDKN2CP42773 168 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 POLD2P49005 469 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PSEN2P49810 448 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DDX39BQ13838 428 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PHKG1Q16816 387 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ATAD3BQ5T9A4 648 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PROSER1Q86XN7 944 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 MUL1Q969V5 352 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 BEX2Q9BXY8 128 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 TNKS2Q9H2K2 1166 aa12.15□□□□□ -0.46
HSPG2-211ENST00000486901 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 INTS6Q9UL03 887 aaKnown RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-211ENST00000486901 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 AP3D1O14617 1153 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TFECO14948 347 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 ALPIP09923 528 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CA5AP35218 305 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 IL2P60568 153 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 COL9A2Q14055 689 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CLCA4Q14CN2 919 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PLEKHG7Q6ZR37 379 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 GOLGA7Q7Z5G4 137 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 NECAB2Q7Z6G3 386 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 FAM217AQ8IXS0 508 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TERB1Q8NA31 727 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 HDAC2Q92769 488 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 LGALS12Q96DT0 336 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SEPT5Q99719 369 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CCSER2Q9H7U1 834 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 AKIP1Q9NQ31 210 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 LATS2Q9NRM7 1088 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 DNAJB9Q9UBS3 223 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PKP3Q9Y446 797 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 B4GALT3O60512 393 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 SERPINF2P08697 491 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 UMPSP11172 480 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 ODC1P11926 461 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CD6P30203 668 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 IDH2P48735 452 aaKnown RBP12.14□□□□□ -0.47
HSPG2-211ENST00000486901 TRPC1P48995 793 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 CCL23P55773 120 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 DGUOKQ16854 277 aa12.14□□□□□ -0.47
HSPG2-211ENST00000486901 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms