RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SLC22A15Q8IZD6 547 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 DSELQ8IZU8 1212 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 OR2T11Q8NH01 316 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 WDR60Q8WVS4 1066 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 ZNF514Q96K75 400 aaPredicted RBP16.33■□□□□ 0.2
CTSA-207ENST00000484855 PRO3102Q9H379 93 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 TRPS1Q9UHF7 1281 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 PIAS3Q9Y6X2 628 aa16.33■□□□□ 0.2
CTSA-207ENST00000484855 KRT87PA6NCN2 255 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 ARHGEF33A8MVX0 844 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 C2CD4DB7Z1M9 353 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 LIN7AO14910 233 aaPredicted RBP16.32■□□□□ 0.2
CTSA-207ENST00000484855 WDR47O94967 919 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 CATP04040 527 aaKnown RBP16.32■□□□□ 0.2
CTSA-207ENST00000484855 IDO1P14902 403 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 ZNF8P17098 575 aaPredicted RBP16.32■□□□□ 0.2
CTSA-207ENST00000484855 GPX3P22352 226 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 MAPK9P45984 424 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 SLC6A12P48065 614 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 ACADVLP49748 655 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 ART3Q13508 389 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 GSTA3Q16772 222 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 ZNF658BQ4V348 819 aaPredicted RBP16.32■□□□□ 0.2
CTSA-207ENST00000484855 PNCKQ6P2M8 343 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 HEATR4Q86WZ0 1026 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 MIER2Q8N344 545 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 IL17RCQ8NAC3 791 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 GANCQ8TET4 914 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 FOPNLQ96NB1 174 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 NPAS2Q99743 824 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 HEBP1Q9NRV9 189 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 NDE1Q9NXR1 346 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 F5P12259 2224 aa16.32■□□□□ 0.2
CTSA-207ENST00000484855 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 HOXB2P14652 356 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 POU3F3P20264 500 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 NME5P56597 212 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 IRX1P78414 480 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 STX5Q13190 355 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 TRMT5Q32P41 509 aaKnown RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 PTCHD3Q3KNS1 767 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 MMEL1Q495T6 779 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 CRTC3Q6UUV7 619 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 RALGPS2Q86X27 583 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 CFAP206Q8IYR0 622 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 FBXL8Q96CD0 374 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 COX14Q96I36 57 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 SLC25A23Q9BV35 468 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 MRPL1Q9BYD6 325 aaKnown RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 MKRN2Q9H000 416 aaKnown RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 FBRSQ9HAH7 460 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 GULP1Q9UBP9 304 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 GRXCR2A6NFK2 248 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 LOC730098B7Z3J9 87 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 H3BM21 787 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 KLF8O95600 359 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 DNTTP04053 509 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 CCND1P24385 295 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 PDHA2P29803 388 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 BDKRB1P46663 353 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 ZXDCQ2QGD7 858 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 PLA2G4EQ3MJ16 856 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 MYLK4Q86YV6 388 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 PYCR2Q96C36 320 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 LINC00615Q96LM1 132 aaPredicted RBP16.31■□□□□ 0.2
CTSA-207ENST00000484855 HBEGFQ99075 208 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 TRPV5Q9NQA5 729 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 FBXL12Q9NXK8 326 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 GPR34Q9UPC5 381 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
CTSA-207ENST00000484855 FFAR3O14843 346 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 GPR42O15529 346 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 ADAM23O75077 832 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 PDE5AO76074 875 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 CLDN9O95484 217 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 EPORP19235 508 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 ERVK-8P63133 956 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 CDK3Q00526 305 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 ABRAXAS2Q15018 415 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 C1orf146Q5VVC0 180 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 REP15Q6BDI9 236 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 DOK6Q6PKX4 331 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 Q6ZSR9 355 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 TRMT11Q7Z4G4 463 aaKnown RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 ZNF547Q8IVP9 402 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 PGAM4Q8N0Y7 254 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 FNDC5Q8NAU1 212 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 KCNV2Q8TDN2 545 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 FOXJ1Q92949 421 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 SLC29A3Q9BZD2 475 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
CTSA-207ENST00000484855 C8orf33Q9H7E9 229 aaPredicted RBP16.3■□□□□ 0.2
CTSA-207ENST00000484855 ACTR8Q9H981 624 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms