RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MRM3Q9HC36 420 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 PADI3Q9ULW8 664 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 CAB39Q9Y376 341 aaPredicted RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 CREG1O75629 220 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 GSTM2P28161 218 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 RGRP47804 291 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 CYP27C1Q4G0S4 372 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 Q6ZPB1 254 aaPredicted RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 GOLGA7Q7Z5G4 137 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 STX19Q8N4C7 294 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 HDAC2Q92769 488 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 PANX1Q96RD7 426 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 APOL4Q9BPW4 351 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 TSEN34Q9BSV6 310 aaKnown RBP12.48□□□□□ -0.41
VPS52-218ENST00000482399 LRTM1Q9HBL6 345 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
VPS52-218ENST00000482399 PNMA8CA0A1B0GUJ8 204 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 TAF4O00268 1085 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 COQ9O75208 318 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 OTCP00480 354 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 F2P00734 622 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 DNTTP04053 509 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 CYP11A1P05108 521 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 DCTP40126 519 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 GNPDA1P46926 289 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 FOXM1Q08050 763 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 KCNJ8Q15842 424 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 NKG7Q16617 165 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 DHRS4L2Q6PKH6 230 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 CARNMT1Q8N4J0 409 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 PDPRQ8NCN5 879 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 KLHDC9Q8NEP7 349 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 SH3GL1Q99961 368 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 DPH2Q9BQC3 489 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 DCSTAMPQ9H295 470 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ATP13A3Q9H7F0 1226 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ARL15Q9NXU5 204 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZNF638Q14966 1978 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 TCRBV5S2A0A599 114 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 M0R129 80 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 AQP9O43315 295 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 AIREO43918 545 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 SEC14L2O76054 403 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 SLC25A14O95258 325 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 BMP4P12644 408 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 GJA8P48165 433 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 TTPAP49638 278 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 RPS3AP61247 264 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 BOP1Q14137 746 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 PON2Q15165 354 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ATXN7L2Q5T6C5 722 aaPredicted RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 PDE12Q6L8Q7 609 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 GLB1LQ6UWU2 654 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 SETD9Q8NE22 299 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 S100ZQ8WXG8 99 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 PROX1Q92786 737 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 CORO1BQ9BR76 489 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 YTHDF1Q9BYJ9 559 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 DERL2Q9GZP9 239 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 REEP1Q9H902 201 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZIM2Q9NZV7 527 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 MGAMO43451 1857 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 KRT87PA6NCN2 255 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 TMEM221A6NGB7 291 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 FFAR2O15552 330 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 VIPP01282 170 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 OPN1SWP03999 348 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ATXN1LP0C7T5 689 aaKnown RBP12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZXDBP98169 803 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 UPP1Q16831 310 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ADPRMQ3LIE5 342 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 TMEM179BQ7Z7N9 219 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 HIPK1Q86Z02 1210 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 PHYKPLQ8IUZ5 450 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ARRDC2Q8TBH0 407 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 LGALS12Q96DT0 336 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 BTN2A3PQ96KV6 586 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 PPP3R2Q96LZ3 170 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 ZNF583Q96ND8 569 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 KCNC2Q96PR1 638 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
VPS52-218ENST00000482399 TUBA1CQ9BQE3 449 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms