RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RDH14Q9HBH5 336 aa12.24□□□□□ -0.45
TRAPPC12-218ENST00000479897 POT1Q9NUX5 634 aa12.24□□□□□ -0.45
TRAPPC12-218ENST00000479897 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC12-218ENST00000479897 PSMD13Q9UNM6 376 aa12.24□□□□□ -0.45
TRAPPC12-218ENST00000479897 DOLKQ9UPQ8 538 aa12.24□□□□□ -0.45
TRAPPC12-218ENST00000479897 NPEPPSL1A6NEC2 478 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ARHGEF33A8MVX0 844 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 BTN3A1O00481 513 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 NOBOXO60393 691 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 SNX2O60749 519 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 KERAO60938 352 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 C1orf105O95561 183 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 TOP3BO95985 862 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CATP04040 527 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 RBP1P09455 135 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ALPPL2P10696 532 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 TFEBP19484 476 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CYP2A7P20853 494 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 GMPRP36959 345 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ATXN3P54252 364 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 AP1S2P56377 157 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 MAGOHP61326 146 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CDKL1Q00532 357 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 NHLH1Q02575 133 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 SPEM2Q0P670 501 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 SLC14A1Q13336 389 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CCDC153Q494R4 210 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CDKL4Q5MAI5 379 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ZCCHC8Q6NZY4 707 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 CDHR3Q6ZTQ4 885 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ISCA2Q86U28 154 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 RBM12BQ8IXT5 1001 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 FAM181AQ8N9Y4 354 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 FAM46DQ8NEK8 389 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 STAG3L4Q8TBR4 150 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 MAGEC3Q8TD91 643 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 SLC37A2Q8TED4 501 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 PTERQ96BW5 349 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ATOH8Q96SQ7 321 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 MRPL57Q9BQC6 102 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 EDEM2Q9BV94 578 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 GTPBP2Q9BX10 602 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 MRPL46Q9H2W6 279 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 TRIT1Q9H3H1 467 aaKnown RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 PARD6AQ9NPB6 346 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ZNF624Q9P2J8 865 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 IKZF3Q9UKT9 509 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 GRID1Q9ULK0 1009 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 ASF1AQ9Y294 204 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 OARD1Q9Y530 152 aa12.23□□□□□ -0.45
TRAPPC12-218ENST00000479897 LAMA1P25391 3075 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 GOLGA4Q13439 2230 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 OR52A4PA6NMU1 304 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 B4DGG1 531 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 MYO1CO00159 1063 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 CDC7O00311 574 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 CDX4O14627 284 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TM9SF1O15321 606 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 CREB1P16220 341 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 SLC19A1P41440 591 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 IL9RQ01113 521 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 GPS2Q13227 327 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 SF3A2Q15428 464 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TCEA2Q15560 299 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 OR4D1Q15615 310 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TSNQ15631 228 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 PHKG1Q16816 387 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 DEFB133Q30KQ1 61 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 INAVAQ3KP66 663 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 N4BP2L1Q5TBK1 243 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 PRR23CQ6ZRP0 262 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 UBE2R2Q712K3 238 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 SPATA6LQ8N4H0 392 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TMEM151AQ8N4L1 468 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 ARL10Q8N8L6 244 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 OR2I1PQ8NGU4 316 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 MAPK15Q8TD08 544 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 SKA2Q8WVK7 121 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 DLG3Q92796 817 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 IQCGQ9H095 443 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 ALG9Q9H6U8 611 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 UCK1Q9HA47 277 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 PARVBQ9HBI1 364 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 IMP3Q9NV31 184 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 ZNF358Q9NW07 568 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TMEM216Q9P0N5 145 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 POLG2Q9UHN1 485 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 ADAMTS6Q9UKP5 1117 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 EMCNQ9ULC0 261 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 TMCO1Q9UM00 188 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 RUVBL2Q9Y230 463 aaKnown RBP12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 PLLPQ9Y342 182 aa12.22□□□□□ -0.45
TRAPPC12-218ENST00000479897 COLEC10Q9Y6Z7 277 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms