RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FAM45AQ8TCE6 357 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 CD200R1Q8TD46 325 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.08■■□□□ 1.771e-6■■■■■ 58.1
CCM2-211ENST00000478582 FAM136AQ96C01 138 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 SLC30A3Q99726 388 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 RHOJQ9H4E5 214 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 ASF1AQ9Y294 204 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 VWA7Q9Y334 891 aa26.08■■□□□ 1.77
CCM2-211ENST00000478582 URB1O60287 2271 aaKnown RBP26.08■■□□□ 1.77
CCM2-211ENST00000478582 EIF3FO00303 357 aaPredicted RBP26.07■■□□□ 1.76
CCM2-211ENST00000478582 DUX1O43812 170 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 PIAS1O75925 651 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 ACSBG2Q5FVE4 666 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 HECTD2Q5U5R9 776 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 NEK10Q6ZWH5 1172 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 OR5K2Q8NHB8 316 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 AHCYL2Q96HN2 611 aaKnown RBP26.07■■□□□ 1.76
CCM2-211ENST00000478582 TRIT1Q9H3H1 467 aaKnown RBP26.07■■□□□ 1.76
CCM2-211ENST00000478582 POLG2Q9UHN1 485 aa26.07■■□□□ 1.76
CCM2-211ENST00000478582 ATXN7L1Q9ULK2 861 aaPredicted RBP26.07■■□□□ 1.76
CCM2-211ENST00000478582 ZZEF1O43149 2961 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 UBXN7O94888 489 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 FAM153BP0C7A2 387 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CBSLP0DN79 551 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 FDXRP22570 491 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CBSP35520 551 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 GP5P40197 560 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CDKN2DP55273 166 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CFHR1Q03591 330 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 FAM153CQ494X1 144 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 NKAIN2Q5VXU1 208 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 WDR74Q6RFH5 385 aaPredicted RBP26.06■■□□□ 1.76
CCM2-211ENST00000478582 USP53Q70EK8 1073 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 PIM3Q86V86 326 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CTAGE3PQ8IX95 158 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 GPATCH11Q8N954 259 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 CYTH2Q99418 400 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 TXLNGYQ9BZA5 131 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 TFB2MQ9H5Q4 396 aaKnown RBP26.06■■□□□ 1.76
CCM2-211ENST00000478582 ACSS3Q9H6R3 686 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 SYNDIG1Q9H7V2 258 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 OGFRQ9NZT2 677 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 TXNDC16Q9P2K2 825 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 TRMT6Q9UJA5 497 aaKnown RBP26.06■■□□□ 1.76
CCM2-211ENST00000478582 ENTPD2Q9Y5L3 495 aa26.06■■□□□ 1.76
CCM2-211ENST00000478582 BRINP1O60477 761 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 MATN4O95460 622 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 MYBL2P10244 700 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 ENO3P13929 434 aaPredicted RBP26.05■■□□□ 1.76
CCM2-211ENST00000478582 ZFP36L1Q07352 338 aaKnown RBP26.05■■□□□ 1.76
CCM2-211ENST00000478582 ABRQ12979 859 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 UBAP2Q5T6F2 1119 aaKnown RBP26.05■■□□□ 1.76
CCM2-211ENST00000478582 TRMT10CQ7L0Y3 403 aaKnown RBP26.05■■□□□ 1.76
CCM2-211ENST00000478582 OR5AR1Q8NGP9 310 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 VPS39Q96JC1 886 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 RBBP8Q99708 897 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 PDP2Q9P2J9 529 aa26.05■■□□□ 1.76
CCM2-211ENST00000478582 ANKRD11Q6UB99 2663 aaPredicted RBP26.04■■□□□ 1.76
CCM2-211ENST00000478582 FAM95CA0A1B0GW59 222 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 ACSL3O95573 720 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 RPN2P04844 631 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 MPC1LP0DKB6 136 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 CSF2RBP32927 897 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 LSSP48449 732 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 PDX1P52945 283 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 KLHL38Q2WGJ6 581 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 GRTP1Q5TC63 336 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 TMEM71Q6P5X7 295 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 TMPRSS9Q7Z410 1059 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 LSMEM2Q8N112 164 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 PPM1NQ8N819 430 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 OR4D9Q8NGE8 314 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 UBXN4Q92575 508 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 TMEM74Q96NL1 305 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 NUDT22Q9BRQ3 303 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 RAB33BQ9H082 229 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 POLR1BQ9H9Y6 1135 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 RDH14Q9HBH5 336 aa26.04■■□□□ 1.76
CCM2-211ENST00000478582 TMX2-CTNND1H3BSU7 103 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 MPOP05164 745 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 AMD1P17707 334 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 CCKBRP32239 447 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 PLCL1Q15111 1095 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 MAP9Q49MG5 647 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 LRRC8EQ6NSJ5 796 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 KLHL35Q6PF15 583 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 CYHR1Q6ZMK1 362 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 ZNF574Q6ZN55 896 aaPredicted RBP26.03■■□□□ 1.76
CCM2-211ENST00000478582 SLITRK4Q8IW52 837 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 OR52E1Q8NGJ3 308 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 ATXN7L3BQ96GX2 97 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 ELMO2Q96JJ3 720 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 FOPNLQ96NB1 174 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 OLFM1Q99784 485 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 EPHA6Q9UF33 1036 aa26.03■■□□□ 1.76
CCM2-211ENST00000478582 PKD1L2Q7Z442 2459 aa26.02■■□□□ 1.76
CCM2-211ENST00000478582 A0A087WV48 116 aa26.02■■□□□ 1.76
CCM2-211ENST00000478582 TLX3O43711 291 aaPredicted RBP26.02■■□□□ 1.76
CCM2-211ENST00000478582 ABHD2P08910 425 aa26.02■■□□□ 1.76
CCM2-211ENST00000478582 TPBGLP0DKB5 382 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms