RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MYO1HQ8N1T3 1032 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 RIBC1Q8N443 379 aaPredicted RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 FAM181AQ8N9Y4 354 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 AVL9Q8NBF6 648 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 RHBDD1Q8TEB9 315 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 MTBPQ96DY7 904 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 CNDP2Q96KP4 475 aaKnown RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 INSM2Q96T92 566 aaPredicted RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 HGH1Q9BTY7 390 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 EVA1BQ9NVM1 165 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 LY6G6EA0A0G2JKS1 128 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 WISP3O95389 354 aaPredicted RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 VIPP01282 170 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 SLC35E2BP0CK96 405 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 MPC1LP0DKB6 136 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 MYF5P13349 255 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ACADLP28330 430 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 CRABP2P29373 138 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 TYK2P29597 1187 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 IL2P60568 153 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 UBE2IP63279 158 aaKnown RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 HHEXQ03014 270 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ZNF844Q08AG5 666 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 RASA2Q15283 850 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 KRT71Q3SY84 523 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 OGFOD3Q6PK18 319 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 TMEM207Q6UWW9 146 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 UNC5DQ6UXZ4 953 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 NEK10Q6ZWH5 1172 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 C17orf82Q86X59 251 aaPredicted RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 CNPY4Q8N129 248 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ARL14Q8N4G2 192 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 CFAP61Q8NHU2 1237 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 EEF1AKMT1Q8WVE0 214 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 TFGQ92734 400 aaPredicted RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 ISL2Q96A47 359 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 COL26A1Q96A83 441 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 FOPNLQ96NB1 174 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 CAMK1GQ96NX5 476 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ZIM3Q96PE6 472 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 SYTL2Q9HCH5 934 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 EURLQ9NYK6 297 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ZNF624Q9P2J8 865 aaPredicted RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 CPNE7Q9UBL6 633 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 ASF1AQ9Y294 204 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 HEBP2Q9Y5Z4 205 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 NFS1Q9Y697 457 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 U3KQA8 63 aa14.94□□□□□ -0.02
SEC13-215ENST00000477547 SNRNP200O75643 2136 aaKnown RBP14.94□□□□□ -0.02
SEC13-215ENST00000477547 LDOC1O95751 146 aaPredicted RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 TSPAN12O95859 305 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 RPN2P04844 631 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 GMPRP36959 345 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 SLC19A1P41440 591 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 MAGEA12P43365 314 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 BDKRB1P46663 353 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 FASLGP48023 281 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 ABRQ12979 859 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 KRT33BQ14525 404 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 CASP8Q14790 479 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 GUSBP11Q6P575 273 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 TBC1D1Q86TI0 1168 aaPredicted RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 DCUN1D3Q8IWE4 304 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 OR5AR1Q8NGP9 310 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 BAHD1Q8TBE0 780 aaPredicted RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 ANKRD49Q8WVL7 239 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 ROPN1BQ9BZX4 212 aaPredicted RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 TRIT1Q9H3H1 467 aaKnown RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 ROPN1Q9HAT0 212 aaPredicted RBP14.93□□□□□ -0.02
SEC13-215ENST00000477547 PCMTD2Q9NV79 361 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 LGALS13Q9UHV8 139 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 PADI4Q9UM07 663 aa14.93□□□□□ -0.02
SEC13-215ENST00000477547 A0A087X1B8 175 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 A0A096LPK6 155 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 NPEPPSL1A6NEC2 478 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 PCNX2A6NKB5 2137 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 RHPN2P1A8MT19 583 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CBFA2T3O75081 653 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CATP04040 527 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 C2P06681 752 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CKMT1AP12532 417 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 XRCC1P18887 633 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 KRT15P19012 456 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 NDUFS1P28331 727 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 MAPK9P45984 424 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 DUSP3P51452 185 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 IRF9Q00978 393 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 DNAJC3Q13217 504 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 SP140Q13342 867 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CSHL1Q14406 222 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 PLCL1Q15111 1095 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 LRIG3Q6UXM1 1119 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CCDC91Q7Z6B0 441 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 PIP4P1Q86T03 277 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms