RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 IRS1P35568 1242 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 THPOP40225 353 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 RPL35P42766 123 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 NR4A2P43354 598 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 RABIFP47224 123 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 LIMS1P48059 325 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SOX9P48436 509 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 HSPA7P48741 367 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 RAD23AP54725 363 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CASP6P55212 293 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KCNQ4P56696 695 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SOX8P57073 446 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ARF6P62330 175 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 PSPHP78330 225 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 HTRA4P83105 476 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 SOX4Q06945 474 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 CD300CQ08708 224 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 BNIP2Q12982 314 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 IL24Q13007 206 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 DUSP8Q13202 625 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SEMA3BQ13214 749 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MAB21L1Q13394 359 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 DGKZQ13574 1117 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ALKBH1Q13686 389 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 IL18Q14116 193 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SMAD2Q15796 467 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 PSMD5Q16401 504 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 PDK4Q16654 411 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KYNUQ16719 465 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SLC5A12Q1EHB4 618 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GOLGA7BQ2TAP0 167 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 HKDC1Q2TB90 917 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 INAVAQ3KP66 663 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MOGAT2Q3SYC2 334 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZBED5Q49AG3 693 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CDNFQ49AH0 187 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GPR33Q49SQ1 333 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 FNDC3BQ53EP0 1204 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 TAF1BQ53T94 588 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF618Q5T7W0 954 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KLHDC7AQ5VTJ3 777 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 UBE2UQ5VVX9 321 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF772Q68DY9 489 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 OGFOD2Q6N063 350 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 RSBN1LQ6PCB5 846 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZCCHC12Q6PEW1 402 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 USP17L6PQ6QN14 398 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KIAA1324Q6UXG2 1013 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ISLR2Q6UXK2 745 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CERS6Q6ZMG9 384 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF782Q6ZMW2 699 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 USP53Q70EK8 1073 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CENPUQ71F23 418 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ERN2Q76MJ5 926 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 TRMT11Q7Z4G4 463 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 REC114Q7Z4M0 266 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 BIVMQ86UB2 503 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 IGFN1Q86VF2 1251 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TMEM17Q86X19 198 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 DHFR2Q86XF0 187 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZDHHC13Q8IUH4 622 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SIAH1Q8IUQ4 282 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MISPQ8IVT2 679 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TUSC5Q8IXB3 177 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KBTBD2Q8IY47 623 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CDK20Q8IZL9 346 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 FAM185AQ8N0U4 392 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SLC35F6Q8N357 371 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CLIP4Q8N3C7 705 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CADM2Q8N3J6 435 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF561Q8N587 486 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 FAM160A2Q8N612 972 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 CCDC185Q8N715 623 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF511Q8NB15 262 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CPEB3Q8NE35 698 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 OR4C15Q8NGM1 316 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 OR5M1Q8NGP8 315 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 OR10J5Q8NHC4 309 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 KCNG4Q8TDN1 519 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GRHL3Q8TE85 626 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TSEN15Q8WW01 171 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 DCPSQ96C86 337 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 EAF2Q96CJ1 260 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ISOC1Q96CN7 298 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 PTCD3Q96EY7 689 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 LINGO1Q96FE5 620 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 FEM1CQ96JP0 617 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GJD4Q96KN9 370 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 MAGEB10Q96LZ2 347 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF48Q96MX3 618 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZNF385AQ96PM9 386 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 PHF12Q96QT6 1004 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 PPP1R16BQ96T49 567 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZBTB18Q99592 522 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TUBGCP2Q9BSJ2 902 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 PCGF1Q9BSM1 259 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SOX7Q9BT81 388 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms