RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PMPCBO75439 489 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CYP1A2P05177 515 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 UMODP07911 640 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 HBQ1P09105 142 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC35G4P0C7Q5 338 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CBSLP0DN79 551 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SKILP12757 684 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PVRP15151 417 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CAPN3P20807 821 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 AGXTP21549 392 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 NDUFS1P28331 727 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PRDX3P30048 256 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CBSP35520 551 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SPAM1P38567 509 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SSR1P43307 286 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 TSFMP43897 325 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 TAS2R40P59535 323 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 AP1B1Q10567 949 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 AIMP2Q13155 320 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ART3Q13508 389 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PDK2Q15119 407 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PPP2R5EQ16537 467 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CYP2A13Q16696 494 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 HADHQ16836 314 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 LONRF2Q1L5Z9 754 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 DEFB110Q30KQ9 67 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 BCL7AQ4VC05 210 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SIRPB2Q5JXA9 342 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ZFYVE27Q5T4F4 411 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 C1orf189Q5VU69 101 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MLIPQ5VWP3 458 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ZDHHC20Q5W0Z9 365 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 B3GNTL1Q67FW5 361 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 RHBDD2Q6NTF9 364 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 IGFL2Q6UWQ7 119 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SPNS3Q6ZMD2 512 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 B4GALNT4Q76KP1 1039 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 DET1Q7L5Y6 550 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 DAAM2Q86T65 1068 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 FJX1Q86VR8 437 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MAP7D3Q8IWC1 876 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CCDC116Q8IYX3 515 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PLD5Q8N7P1 536 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ACVR1CQ8NER5 493 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 OR4E2Q8NGC2 313 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 OR2L2Q8NH16 312 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 PROKR1Q8TCW9 393 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 COG1Q8WTW3 980 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 NAT14Q8WUY8 206 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 FAR1Q8WVX9 515 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 RAPGEF5Q92565 580 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 LINC00615Q96LM1 132 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 LURAP1Q96LR2 239 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF830Q96NB3 372 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 OLFM3Q96PB7 478 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 GBP5Q96PP8 586 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 RNF157Q96PX1 679 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 NRTNQ99748 197 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SLX1AQ9BQ83 275 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC7A5P2Q9GIP4 190 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 KLHL25Q9H0H3 589 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SRMSQ9H3Y6 488 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 FAM60AQ9NP50 221 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SLC6A20Q9NP91 592 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ANO10Q9NW15 660 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 IL17CQ9P0M4 197 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 COPG2Q9UBF2 871 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 FAM8A1Q9UBU6 413 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 SERTAD3Q9UJW9 196 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 ACSL5Q9ULC5 683 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 CDYLQ9Y232 598 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 HEY1Q9Y5J3 304 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 KLF2Q9Y5W3 355 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 COLEC10Q9Y6Z7 277 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 MYO7BQ6PIF6 2116 aa4.96□□□□□ -1.62
SNRNP40-204ENST00000474025 DOCK10Q96BY6 2186 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ANKRD12Q6UB98 2062 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 A0A0A6YYK5 440 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 A0A1B0GTL3 188 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 LOC285095A0A1B0GVY8 99 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CCDC66A2RUB6 948 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 KLHL33A6NCF5 533 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ZNF487B1APH4 448 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 AGPSO00116 658 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 BTN3A3O00478 584 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ZSCAN9O15535 394 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 HCRTR1O43613 425 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 BUD23O43709 281 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 ALOX12BO75342 701 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 OR2B3O76000 313 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PROSCO94903 275 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PRAMEF1O95521 474 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 POLBP06746 335 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 CTSBP07858 339 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 PYGMP11217 842 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 BMP2P12643 396 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 MSH3P20585 1137 aa4.95□□□□□ -1.62
SNRNP40-204ENST00000474025 AKT1P31749 480 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms