RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SCINQ9Y6U3 715 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 RNF215Q9Y6U7 377 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 A0A1W2PQM1 296 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 SIGLEC16A6NMB1 481 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 OR5K4A6NMS3 321 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ENO4A6NNW6 628 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 RASA4BC9J798 803 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 FOXN3O00409 490 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 RASA4O43374 803 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CREB3O43889 395 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PRPSAP2O60256 369 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 KLHL41O60662 606 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 LRCH4O75427 683 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 RNF8O76064 485 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 RECQL5O94762 991 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 MTA2O94776 668 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CALCAP01258 141 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 MT-ND3P03897 115 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 IVLP07476 585 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ANKRD34CP0C6C1 535 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 THRAP10827 490 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 MYF5P13349 255 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ENPP1P22413 925 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 NR4A1P22736 598 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ALDH4A1P30038 563 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 SOX5P35711 763 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 TRIM23P36406 574 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 FASLGP48023 281 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 LIMK2P53671 638 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CDH6P55285 790 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 SESN3P58005 492 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CCL7P80098 99 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 DPTQ07507 201 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 IL10RBQ08334 325 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 KLRB1Q12918 225 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ACOX1Q15067 660 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 WSCD2Q2TBF2 565 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 AMZ1Q400G9 498 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 LACTB2Q53H82 288 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 ATXN7L2Q5T6C5 722 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 TAF3Q5VWG9 929 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 NAA35Q5VZE5 725 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 AFMIDQ63HM1 303 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 RAET1GQ6H3X3 334 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PNCKQ6P2M8 343 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 TMEM71Q6P5X7 295 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 WDR74Q6RFH5 385 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 KDELC2Q7Z4H8 507 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 C17orf82Q86X59 251 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 PHF13Q86YI8 300 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 GALNT13Q8IUC8 556 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PLXDC1Q8IUK5 500 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 LRRC49Q8IUZ0 686 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CACNA2D3Q8IZS8 1091 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ATPAF2Q8N5M1 289 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 Q8N9G6 341 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 CHAC2Q8WUX2 184 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 APOBEC4Q8WW27 367 aaKnown RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 RXFP2Q8WXD0 754 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 CENPIQ92674 756 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 USP7Q93009 1102 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 TSACCQ96A04 125 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 FUBP1Q96AE4 644 aaKnown RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 ECHDC3Q96DC8 303 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 DTD2Q96FN9 168 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 HIST1H2AHQ96KK5 128 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PSKH2Q96QS6 385 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 OR2M4Q96R27 311 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 HIST1H2AJQ99878 128 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 C11orf70Q9BRQ4 267 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.47□□□□□ -1.85
XRN1-209ENST00000472625 SLC29A3Q9BZD2 475 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 TCEAL2Q9H3H9 227 aaPredicted RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 RMI1Q9H9A7 625 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 FGF22Q9HCT0 170 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 MRPL47Q9HD33 250 aaKnown RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 ACP6Q9NPH0 428 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 MBNL1Q9NR56 388 aaKnown RBP3.47□□□□□ -1.85
XRN1-209ENST00000472625 PARVAQ9NVD7 372 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 SLC39A1Q9NY26 324 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 VPS18Q9P253 973 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 ANKMY1Q9P2S6 941 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 AMACRQ9UHK6 382 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 LCMT1Q9UIC8 334 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 MOSPD1Q9UJG1 213 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 KCND3Q9UK17 655 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 OR1A2Q9Y585 309 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 NAV2Q8IVL1 2488 aa3.47□□□□□ -1.85
XRN1-209ENST00000472625 PIEZO2Q9H5I5 2752 aa3.46□□□□□ -1.85
XRN1-209ENST00000472625 LRRK2Q5S007 2527 aa3.46□□□□□ -1.85
XRN1-209ENST00000472625 TLN1Q9Y490 2541 aaKnown RBP3.46□□□□□ -1.85
XRN1-209ENST00000472625 PTPN13Q12923 2485 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 TP53BP1Q12888 1972 aaPredicted RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 KIR2DS5A0A0G2JLQ3 304 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 A0A0G2JNG1 304 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 IGHV5-10-1A0A0J9YXX1 117 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 A0A1W2PNU3 283 aaPredicted RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 A0A1W2PRX2 142 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms