RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CMTM3Q96MX0 182 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 C7orf26Q96N11 449 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 VN1R1Q9GZP7 353 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 WWTR1Q9GZV5 400 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 A4GALTQ9NPC4 353 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 FBXL17Q9UF56 701 aa3.94□□□□□ -1.78
CD46-213ENST00000471987 CORO1CQ9ULV4 474 aaPredicted RBP3.94□□□□□ -1.78
CD46-213ENST00000471987 MYO1GB0I1T2 1018 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 TPPPO94811 219 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 PON1P27169 355 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 MELKQ14680 651 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 E2F5Q15329 346 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 HOGA1Q86XE5 327 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 TDRD7Q8NHU6 1098 aaKnown RBP3.93□□□□□ -1.78
CD46-213ENST00000471987 ZFAND2BQ8WV99 257 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 PGAM5Q96HS1 289 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 DGCR6LQ9BY27 220 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 ARRDC1-AS1Q9H2J1 176 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 ATP13A3Q9H7F0 1226 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 SDR39U1Q9NRG7 319 aaPredicted RBP3.93□□□□□ -1.78
CD46-213ENST00000471987 IRAK4Q9NWZ3 460 aa3.93□□□□□ -1.78
CD46-213ENST00000471987 MEX3AA1L020 520 aaKnown RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 FRMD3A2A2Y4 597 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 GAPDHSO14556 408 aaPredicted RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 RSL1D1O76021 490 aaKnown RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 ZSCAN5DPP0CG00 497 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 CRYMQ14894 314 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 KIAA0930Q6ICG6 404 aaPredicted RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 CLEC17AQ6ZS10 378 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 TICAM2Q86XR7 235 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 NAXEQ8NCW5 288 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 OR2L2Q8NH16 312 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 ARHGAP45Q92619 1136 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 ERLEC1Q96DZ1 483 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 SLC26A6Q9BXS9 759 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 TAS2R14Q9NYV8 317 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 C9orf78Q9NZ63 289 aaPredicted RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 EPHA6Q9UF33 1036 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 GRID1Q9ULK0 1009 aa3.92□□□□□ -1.78
CD46-213ENST00000471987 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD46-213ENST00000471987 EXO1Q9UQ84 846 aaKnown RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD46-213ENST00000471987 ASTN2O75129 1339 aaPredicted RBP3.92□□□□□ -1.78
CD46-213ENST00000471987 SSX4O60224 188 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 DFFBO76075 338 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 LAMP2P13473 410 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 CHMP24386 653 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 SLC6A6P31641 620 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 PDX1P52945 283 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 GSCP56915 257 aaPredicted RBP3.91□□□□□ -1.78
CD46-213ENST00000471987 G3BP1Q13283 466 aaKnown RBP eCLIP3.91□□□□□ -1.78
CD46-213ENST00000471987 KCNC3Q14003 757 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 KRT33BQ14525 404 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 ZNF343Q6P1L6 599 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 GPRIN3Q6ZVF9 776 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 INTS8Q75QN2 995 aaKnown RBP3.91□□□□□ -1.78
CD46-213ENST00000471987 Q8N377 158 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 PRSS33Q8NF86 280 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 SLCO2A1Q92959 643 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 AZIN2Q96A70 460 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 PSMD1Q99460 953 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 TRIM6Q9C030 488 aaPredicted RBP3.91□□□□□ -1.78
CD46-213ENST00000471987 CHMP1AQ9HD42 196 aaPredicted RBP3.91□□□□□ -1.78
CD46-213ENST00000471987 PPP1R3CQ9UQK1 317 aa3.91□□□□□ -1.78
CD46-213ENST00000471987 TDRD15B5MCY1 1934 aaKnown RBP3.91□□□□□ -1.78
CD46-213ENST00000471987 TDRD9Q8NDG6 1382 aaKnown RBP3.9□□□□□ -1.78
CD46-213ENST00000471987 SOCS3O14543 225 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 ZNF195O14628 629 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 OR2C1O95371 312 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 PRLRP16471 622 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 GABRB1P18505 474 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 ARL3P36405 182 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 MMP12P39900 470 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 PGFP49763 221 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 B3GALT5-AS1P59052 145 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 DMPKQ09013 629 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 PEX6Q13608 980 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 FAM98BQ52LJ0 330 aaKnown RBP3.9□□□□□ -1.79
CD46-213ENST00000471987 PTAR1Q7Z6K3 402 aaPredicted RBP3.9□□□□□ -1.79
CD46-213ENST00000471987 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 PPM1MQ96MI6 270 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 OR6C1Q96RD1 312 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 FNBP1Q96RU3 617 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 PANK3Q9H999 370 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 NUDT4Q9NZJ9 180 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 RHCGQ9UBD6 479 aa3.9□□□□□ -1.79
CD46-213ENST00000471987 A0A1W2PNU3 283 aaPredicted RBP3.89□□□□□ -1.79
CD46-213ENST00000471987 A0A1W2PR77 199 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 RNASEH1O60930 286 aaKnown RBP3.89□□□□□ -1.79
CD46-213ENST00000471987 RB1P06400 928 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 ACADMP11310 421 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 CDH8P55286 799 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 PAX9P55771 341 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 NFATC2Q13469 925 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 KLHL26Q53HC5 615 aa3.89□□□□□ -1.79
CD46-213ENST00000471987 Q6ZRP5 223 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms