RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 RHOT2Q8IXI1 618 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 SLC25A41Q8N5S1 370 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 Q8NA96 180 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 HM13Q8TCT9 377 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 CPLX3Q8WVH0 158 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 LCN9Q8WX39 176 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 ULK4Q96C45 1275 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 LRRC45Q96CN5 670 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 NUDT9Q9BW91 350 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 TLR10Q9BXR5 811 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 AKIRIN1Q9H9L7 192 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 AGPAT4Q9NRZ5 378 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 PCMTD2Q9NV79 361 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 LUZP4Q9P127 313 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 GPN3Q9UHW5 284 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 B3GNT3Q9Y2A9 372 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 CFAP20Q9Y6A4 193 aaKnown RBP8.86□□□□□ -0.99
CPSF4-211ENST00000471455 AP1M2Q9Y6Q5 423 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 ABCA12Q86UK0 2595 aa8.86□□□□□ -0.99
CPSF4-211ENST00000471455 UTP20O75691 2785 aaKnown RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SEC16AO15027 2179 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 CACNA1DQ01668 2161 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ANKUB1A6NFN9 424 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SLC9B1P1A6NJY1 282 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 C2orf74A8MZ97 194 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A9O60656 530 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 LDLRP01130 860 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A6P19224 532 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 POLR2CP19387 275 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 NFKB1P19838 968 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A1P22309 533 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A4P22310 534 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 OTX2P32243 289 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 DCTP40126 519 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 FOLR3P41439 243 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SLC1A1P43005 524 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UBASH3AP57075 661 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 FANCCQ00597 558 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ABRQ12979 859 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ATP1A4Q13733 1029 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 PRKD1Q15139 912 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SLC1A5Q15758 541 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 PRR30Q53SZ7 412 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ARSJQ5FYB0 599 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 DUS1LQ6P1R4 473 aaKnown RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SARM1Q6SZW1 724 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 KDELC1Q6UW63 502 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 DET1Q7L5Y6 550 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 MRGPREQ86SM8 312 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 CPNE8Q86YQ8 564 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SLC34A3Q8N130 599 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ZADH2Q8N4Q0 377 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 RBMXL3Q8N7X1 1067 aaKnown RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 IPMKQ8NFU5 416 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 OR4E2Q8NGC2 313 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF398Q8TD17 642 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 COG1Q8WTW3 980 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 LINC00615Q96LM1 132 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 FCRL5Q96RD9 977 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 PITPNM3Q9BZ71 974 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A7Q9HAW7 530 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A10Q9HAW8 530 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UGT1A8Q9HAW9 530 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ZNHIT6Q9NWK9 470 aaKnown RBP8.85□□□□□ -0.99
CPSF4-211ENST00000471455 FAM8A1Q9UBU6 413 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 NDOR1Q9UHB4 597 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 CRLS1Q9UJA2 301 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 TRHDEQ9UKU6 1024 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 NENFQ9UMX5 172 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.85□□□□□ -0.997e-6■■□□□ 12.1
CPSF4-211ENST00000471455 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
CPSF4-211ENST00000471455 WIPF3A6NGB9 483 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 C3orf70A6NLC5 250 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 GOLGA6L19H0YKK7 550 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 SPOPO43791 374 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 AKR1B10O60218 316 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 KDM1AO60341 852 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ANXA9O76027 345 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 GSTM1P09488 218 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 TPM1P09493 284 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ITGALP20701 1170 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PRDX3P30048 256 aaKnown RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PBX1P40424 430 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ARCN1P48444 511 aaKnown RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PRLHRP49683 370 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 GSTM4Q03013 218 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 SSPNQ14714 243 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 MYBPC3Q14896 1274 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 TAF1AQ15573 450 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PTCHD3Q3KNS1 767 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 IRAK1BP1Q5VVH5 260 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ITPRIPL1Q6GPH6 555 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 IGFL3Q6UXB1 125 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 NPNTQ6UXI9 565 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms