RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, human

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-222	ENST00000470953	PTPRR	Q15256	657 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	C3AR1	Q16581	482 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PLEKHS1	Q5SXH7	462 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	CACHD1	Q5VU97	1274 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	SHE	Q5VZ18	495 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	SLC9A4	Q6AI14	798 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	FAM180A	Q6UWF9	173 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	FAM198B	Q6UWH4	519 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TMEM207	Q6UWW9	146 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	MFSD7	Q6UXD7	560 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	NPNT	Q6UXI9	565 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RFLNA	Q6ZTI6	216 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PEX26	Q7Z412	305 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PRSS42	Q7Z5A4	293 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TSPAN33	Q86UF1	283 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	NT5DC3	Q86UY8	548 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	CDKL3	Q8IVW4	592 aa	Predicted RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	DMRTC2	Q8IXT2	367 aa	Predicted RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	KATNAL2	Q8IYT4	538 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RCOR2	Q8IZ40	523 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	VWA5B2	Q8N398	1253 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PQLC3	Q8N755	202 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PLD5	Q8N7P1	536 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	FAM71B	Q8TC56	605 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	PPP4R1	Q8TF05	950 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	ROBO4	Q8WZ75	1007 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	MAML1	Q92585	1016 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RSC1A1	Q92681	617 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	AP2M1	Q96CW1	435 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	DTD2	Q96FN9	168 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	COQ10A	Q96MF6	247 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	NSMCE3	Q96MG7	304 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TSGA13	Q96PP4	275 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	GPATCH1	Q9BRR8	931 aa	Known RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	DESI2	Q9BSY9	194 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	NLN	Q9BYT8	704 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	GPR63	Q9BZJ6	419 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TSGA10	Q9BZW7	698 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	SCHIP1	Q9P0W5	487 aa	Predicted RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	IMPACT	Q9P2X3	320 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RSPH14	Q9UHP6	348 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	CD84	Q9UIB8	345 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TINAG	Q9UJW2	476 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RARRES3	Q9UL19	164 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	RPL26L1	Q9UNX3	145 aa	Known RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	TFR2	Q9UP52	801 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	ALG6	Q9Y672	507 aa		5.69	□□□□□ -1.5
VARS-222	ENST00000470953	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.69	□□□□□ -1.5
VARS-222	ENST00000470953	hCG_1818297	A0A087WSY0	165 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953		A0A0J9YYE9	177 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	LILRA5	A6NI73	299 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	MEN1	O00255	615 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	TOX3	O15405	576 aa	Predicted RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SNX2	O60749	519 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	CPNE3	O75131	537 aa	Known RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PMPCB	O75439	489 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SCRG1	O75711	98 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ZNF189	O75820	626 aa	Predicted RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	UBXN7	O94888	489 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	TJP3	O95049	919 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	LCA5L	O95447	670 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PEX11B	O96011	259 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SOD1	P00441	154 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	TRBC1	P01850	177 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	RAF1	P04049	648 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	RAB40AL	P0C0E4	278 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PECAM1	P16284	738 aa	Predicted RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	LHCGR	P22888	699 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	CDKN2B	P42772	138 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	MARCKSL1	P49006	195 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	HADHB	P55084	474 aa	Known RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	RWDD2B	P57060	319 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	UBE2I	P63279	158 aa	Known RBP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ZBTB17	Q13105	803 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PRPSAP1	Q14558	356 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PPP2R5E	Q16537	467 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.68	□□□□□ -1.5
VARS-222	ENST00000470953	PTCHD3	Q3KNS1	767 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ZNF569	Q5MCW4	686 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SEL1L2	Q5TEA6	688 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ALS2CL	Q60I27	953 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	ITPRIPL1	Q6GPH6	555 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	IGFL2	Q6UWQ7	119 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953		Q6ZVL8	140 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	B4GALNT4	Q76KP1	1039 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	HSD11B1L	Q7Z5J1	315 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SLC9B2	Q86UD5	537 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	GALNT13	Q8IUC8	556 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	TEX26	Q8N6G2	289 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	BCORP1	Q8N888	145 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	CLEC1A	Q8NC01	280 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	IPMK	Q8NFU5	416 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	EXD1	Q8NHP7	514 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	TM9SF4	Q92544	642 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	NR4A3	Q92570	626 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	FATE1	Q969F0	183 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SCRN2	Q96FV2	425 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	SLC41A2	Q96JW4	573 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953		Q96MF0	132 aa		5.68	□□□□□ -1.5
VARS-222	ENST00000470953	OLFM3	Q96PB7	478 aa		5.68	□□□□□ -1.5

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