RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 HAS2Q92819 552 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 MAGED4Q96JG8 741 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 SPSB2Q99619 263 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 TMEM121Q9BTD3 319 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 IL26Q9NPH9 171 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 MEMO1Q9Y316 297 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 STAB1Q9NY15 2570 aa11.55□□□□□ -0.56
LSM2-209ENST00000470083 FLNAP21333 2647 aaKnown RBP11.55□□□□□ -0.56
LSM2-209ENST00000470083 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 C17orf113A0A1B0GUU1 675 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 C2orf74A8MZ97 194 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 PMPCBO75439 489 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 USP1O94782 785 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 MT-CYBP00156 380 aaPredicted RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 RARAP10276 462 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 FOSL1P15407 271 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 SOX11P35716 441 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 GSE1Q14687 1217 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 ZIC1Q15915 447 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 RBBP7Q16576 425 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 NKG7Q16617 165 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 SLC5A12Q1EHB4 618 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 LONRF2Q1L5Z9 754 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 TCP11X2Q5H9J9 407 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 CCDC122Q5T0U0 273 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 SPESP1Q6UW49 350 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 Q6ZPB1 254 aaPredicted RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 OVCH1Q7RTY7 1134 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 OR2L2Q8NH16 312 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.54□□□□□ -0.56
LSM2-209ENST00000470083 SRPK1Q96SB4 655 aaKnown RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 SLC26A1Q9H2B4 701 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 BPIFA1Q9NP55 256 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 ACTR10Q9NZ32 417 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 RPH3AQ9Y2J0 694 aaPredicted RBP11.54□□□□□ -0.56
LSM2-209ENST00000470083 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
LSM2-209ENST00000470083 AURKAO14965 403 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 GPR39O43194 453 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 ONECUT2O95948 504 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 HPP00738 406 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 CTSBP07858 339 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 PYGMP11217 842 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 IGFBP2P18065 325 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 ITGAXP20702 1163 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 EEF1GP26641 437 aaKnown RBP11.53□□□□□ -0.56
LSM2-209ENST00000470083 HMGCLP35914 325 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 TMPRSS15P98073 1019 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 SRSF11Q05519 484 aaKnown RBP11.53□□□□□ -0.56
LSM2-209ENST00000470083 LTBQ06643 244 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 FOXD4Q12950 439 aaPredicted RBP11.53□□□□□ -0.56
LSM2-209ENST00000470083 PAFAH1B3Q15102 231 aaKnown RBP11.53□□□□□ -0.56
LSM2-209ENST00000470083 GPRC6AQ5T6X5 926 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 ZDHHC20Q5W0Z9 365 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 NCBP2-AS2Q69YL0 99 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 TXNRD3NBQ6F5E7 133 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 TAOK1Q7L7X3 1001 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 HOOK3Q86VS8 718 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 ADGRF3Q8IZF5 1079 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 NINJ1Q92982 152 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 CCM2Q9BSQ5 444 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.53□□□□□ -0.56
LSM2-209ENST00000470083 CLSTN2Q9H4D0 955 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 TFB2MQ9H5Q4 396 aaKnown RBP11.53□□□□□ -0.56
LSM2-209ENST00000470083 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
LSM2-209ENST00000470083 ANKRD12Q6UB98 2062 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 A0A1B0GX78 115 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A9O60656 530 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 PIM1P11309 404 aaPredicted RBP11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A6P19224 532 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 MX2P20592 715 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A1P22309 533 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A4P22310 534 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 ALAS2P22557 587 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 FDXRP22570 491 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 GCGRP47871 477 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 FOLH1Q04609 750 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 KRT81Q14533 505 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 SARM1Q6SZW1 724 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 COX15Q7KZN9 410 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 TRIM73Q86UV7 250 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 TMEM200AQ86VY9 491 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 AMIGO1Q86WK6 493 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 SPPL2CQ8IUH8 684 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 FAM20CQ8IXL6 584 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 KBTBD2Q8IY47 623 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 CNTD1Q8N815 330 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 CCDC110Q8TBZ0 833 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
LSM2-209ENST00000470083 CA5BP1Q8WTZ4 195 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 PHF10Q8WUB8 498 aaKnown RBP11.52□□□□□ -0.57
LSM2-209ENST00000470083 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms