RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 A0A087WUV0 522 aaPredicted RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 FAM95CA0A1B0GW59 222 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 MATN2O00339 956 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 ACSL3O95573 720 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 F7P08709 466 aaPredicted RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 CCKBRP32239 447 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 CDKN2DP55273 166 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 TIAL1Q01085 375 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP39-211ENST00000465282 ABRQ12979 859 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 PDAP1Q13442 181 aaKnown RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 TRA2AQ13595 282 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP39-211ENST00000465282 ISXQ2M1V0 245 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 KLHL38Q2WGJ6 581 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 DUS1LQ6P1R4 473 aaKnown RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 DCUN1D3Q8IWE4 304 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 PHC3Q8NDX5 983 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 OR5AR1Q8NGP9 310 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 GIMAP7Q8NHV1 300 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 SKA2Q8WVK7 121 aaPredicted RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 FAM136AQ96C01 138 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 TSPAN17Q96FV3 270 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 PDLIM5Q96HC4 596 aaKnown RBP16.49■□□□□ 0.23
USP39-211ENST00000465282 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 PDP2Q9P2J9 529 aa16.49■□□□□ 0.23
USP39-211ENST00000465282 PRAMEF33A0A0G2JMD5 474 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 HYAL3O43820 417 aaPredicted RBP16.48■□□□□ 0.23
USP39-211ENST00000465282 FAM153BP0C7A2 387 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 SHMT2P34897 504 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 CAPZBP47756 277 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 PPM1FP49593 454 aaPredicted RBP16.48■□□□□ 0.23
USP39-211ENST00000465282 LIMK2P53671 638 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 SLC12A2P55011 1212 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 INHBCP55103 352 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 IL2P60568 153 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 ZFP36L1Q07352 338 aaKnown RBP16.48■□□□□ 0.23
USP39-211ENST00000465282 FAM153CQ494X1 144 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 NKAIN2Q5VXU1 208 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 USP53Q70EK8 1073 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 FBXO15Q8NCQ5 510 aaPredicted RBP16.48■□□□□ 0.23
USP39-211ENST00000465282 LCN9Q8WX39 176 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 ANKRD7Q92527 254 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 NCSTNQ92542 709 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 RAD51AP1Q96B01 352 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 ZDHHC12Q96GR4 267 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 ELMO2Q96JJ3 720 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 GPR22Q99680 433 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 SLC30A3Q99726 388 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 RAB11FIP5Q9BXF6 653 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 STRADBQ9C0K7 418 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 SRMSQ9H3Y6 488 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 SYTL2Q9HCH5 934 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 OR6C2Q9NZP2 312 aa16.48■□□□□ 0.23
USP39-211ENST00000465282 MN1Q10571 1320 aaPredicted RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 TOX3O15405 576 aaPredicted RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 RIPK2O43353 540 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CSO75390 466 aaKnown RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 PSIP1O75475 530 aaKnown RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 PIAS1O75925 651 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 C1orf105O95561 183 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 C9P02748 559 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CATP04040 527 aaKnown RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 ABCG1P45844 678 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 TARDBPQ13148 414 aaKnown RBP eCLIP16.47■□□□□ 0.23
USP39-211ENST00000465282 PRKG2Q13237 762 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 EIF3IQ13347 325 aaKnown RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 PAQR3Q6TCH7 311 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CCDC91Q7Z6B0 441 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 AMIGO1Q86WK6 493 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 OOSP2Q86WS3 158 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 SLITRK4Q8IW52 837 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CPNE9Q8IYJ1 553 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CARFQ8N187 725 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 RAB42Q8N4Z0 105 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 OR52E1Q8NGJ3 308 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 CFAP61Q8NHU2 1237 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 ASB11Q8WXH4 323 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 ATXN7L3BQ96GX2 97 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 LIN37Q96GY3 246 aaPredicted RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 CD180Q99467 661 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 OLFM1Q99784 485 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 NUDT22Q9BRQ3 303 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 HGH1Q9BTY7 390 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 SCNM1Q9BWG6 230 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 RDH14Q9HBH5 336 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 OGFRQ9NZT2 677 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 ATXN7L1Q9ULK2 861 aaPredicted RBP16.47■□□□□ 0.23
USP39-211ENST00000465282 MSRB2Q9Y3D2 182 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 ENTPD2Q9Y5L3 495 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
USP39-211ENST00000465282 PCM1Q15154 2024 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 OR5K3A6NET4 321 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 GFYI3L273 518 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 HGSO14964 777 aaPredicted RBP16.46■□□□□ 0.23
USP39-211ENST00000465282 ZBTB14O43829 449 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 MYBL2P10244 700 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 TYRP1P17643 537 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 CNTFP26441 200 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 CSF2RBP32927 897 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 SERPINB9P50453 376 aa16.46■□□□□ 0.23
USP39-211ENST00000465282 RAB28P51157 221 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms